Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq121772 89.7 2e-13 >seq121772 Length=16127 Score = 89.7 bits (98), Expect = 2e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34054 TCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGACTCGCGC 34113 || || ||| |||||||| | || ||||||||||||||| |||| ||||| |||||| Sbjct 8169 TCCTCGCGGAACACGAACCACACCATGTCGGCGTCCTGCTCAATCGAGCCGGATTCGCGC 8228 Query 34114 AGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGTTGAGCTGCGAC 34173 || || || | | ||| ||||||| | |||||||| | | |||| ||||||| || Sbjct 8229 AGATCGGAGAGCTGCGGGCGCTTGTCCTCGCGCTGCTCGACCGCGCGGCTGAGCTGGGAG 8288 Query 34174 AGCACGATCACGGG 34187 ||| | | ||| || Sbjct 8289 AGCGCCAGCACCGG 8302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160092265487160