Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= NC_031085.1 Length=166634 Score E Sequences producing significant alignments: (Bits) Value seq115184 84.2 2e-11 seq115180 84.2 2e-11 >seq115184 Length=93111 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 70820 TGGTGCTGATTGACGGAATCGAACCGCCGACCTTCTCATTACAAGTGAGTTGCTCTACCT 70879 |||||| ||| | ||||||||||| ||||||||||||||| | |||| ||||||||| Sbjct 27863 TGGTGCCGATGAAAGGAATCGAACCCTCGACCTTCTCATTACGAATGAGCTGCTCTACCG 27804 Query 70880 ACTGAGCTAAATCAGCAAA 70898 ||||||||| ||| || || Sbjct 27803 ACTGAGCTACATCGGCTAA 27785 >seq115180 Length=148627 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 70820 TGGTGCTGATTGACGGAATCGAACCGCCGACCTTCTCATTACAAGTGAGTTGCTCTACCT 70879 |||||| ||| | ||||||||||| ||||||||||||||| | |||| ||||||||| Sbjct 116692 TGGTGCCGATGAAAGGAATCGAACCCTCGACCTTCTCATTACGAATGAGCTGCTCTACCG 116633 Query 70880 ACTGAGCTAAATCAGCAAA 70898 ||||||||| ||| || || Sbjct 116632 ACTGAGCTACATCGGCTAA 116614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531800807044160