Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_000902.1 Length=60942 Score E Sequences producing significant alignments: (Bits) Value seq1599 250 1e-61 seq3409 178 5e-40 seq3892 147 9e-31 seq6242 116 1e-21 seq4809 105 3e-18 seq1577 102 3e-17 seq5862 98.7 4e-16 seq4482 91.5 6e-14 >seq1599 Length=30855 Score = 250 bits (276), Expect = 1e-61 Identities = 253/329 (77%), Gaps = 13/329 (4%) Strand=Plus/Minus Query 60095 CTTTTCGCACTCGATGAAGTATCTGCGTATCTGTCGGCCTTTTTCGTTACGCTCTACCAT 60154 |||||| ||||| |||||||| | ||| | ||| |||||||| ||||| |||| ||||| Sbjct 20322 CTTTTCACACTCAATGAAGTAACGGCGAACCTGACGGCCTTTGTCGTTGTGCTCCACCAT 20263 Query 60155 CGCCGTTTCTTTGGCTGTATCGAGGGTAAGGTGGTAGTCTTTTTTCCCTCGCCCATAACC 60214 ||| |||||||||||| || ||||| ||||||||||| ||| | ||||| || | ||| Sbjct 20262 TGCCAGTTCTTTGGCTGTGTCCAGGGTGAGGTGGTAGTCCTTTCTGCCTCGTCCGTGACC 20203 Query 60215 TATTTCCCGTTTCTGGGAAATAGCTATATAGTCCTGATTTTCAACGAATCCGTACTCTTC 60274 ||||||||| ||||||||||||||||| |||||||||||||||||||| || |||| | Sbjct 20202 TATTTCCCGATTCTGGGAAATAGCTATGTAGTCCTGATTTTCAACGAAACCAAACTCCGC 20143 Query 60275 AATACGTTCTGTAATCCACGATGCAAAGCGTTTACCTACTCCAAGAAAAGTATGTAAATC 60334 ||| ||||| |||||||||| |||||| | |||| || ||||| || Sbjct 20142 AATCCGTTCGGTAATCCACGTTGCAAAAGG-----------CAAGGAATTCATGTAGCTC 20094 Query 60335 ACGGGCATTAACGAGAAGAGTGGTTTCGTTGGCGATAGTGCCGTTGAATACGGGGATGAG 60394 || |||| | || || |||| |||||| ||||| || ||||| ||||||||||| Sbjct 20093 GCGTGCATCACAAAGTAGGGTGGATTCGTTACTTATAGTTCCTTTGAAAACGGGGATGAG 20034 Query 60395 TTGACTGGTCATGATGACCTCCT-TATTT 60422 ||| | ||||| | || |||| ||||| Sbjct 20033 TTGTGTTGTCAT-TTTACGTCCTCTATTT 20006 >seq3409 Length=8325 Score = 178 bits (196), Expect = 5e-40 Identities = 270/382 (71%), Gaps = 2/382 (1%) Strand=Plus/Plus Query 25638 GCATACCGTGATGGTGCGGGTATCTGGACCATCTGCCGTGGAGCCACCCGGGTGGATGGT 25697 || || | ||| || | || |||||||| || ||| |||| | || ||||| ||||| Sbjct 3032 GCTTATCCTGACGGCGGCGGCATCTGGACGATTTGCGGTGGCGTGACACGGGTAGATGGC 3091 Query 25698 AAGCCTGTTATTCCTGGCATGAAGCTGTCGAAGGAAAAATGCGACCGGGTTAACGCCATT 25757 ||||| || | |||||||||||| | | | || | | || | ||| Sbjct 3092 AAGCCGGTAGTGAAGGGCATGAAGCTGACCGCCGGGCAGTGTGCAAAGATTGATGCCGCA 3151 Query 25758 GAGCGTGATAAGGCGCTGGCATGGGTGGAGAAAAACATCAAAGTGCCGCTGACCGAACCC 25817 || | | |||||||| | |||||||| ||| | ||||||||||| || || | Sbjct 3152 GAACAGCAAAAGGCGCTCGATTGGGTGGATCGCAACGTTAAAGTGCCGCTCACTGAGACT 3211 Query 25818 CAGAAAGCGGGGATCGCGTCATTCTGTCCGTACAACATTGGTCCCGGTAAGTGTTTCCCG 25877 ||||||| || || || ||||| ||||||| || || ||||||||||| || ||| | Sbjct 3212 CAGAAAGTCGGCATTGCCTCATTTTGTCCGTGGAATATCGGTCCCGGTAACTGCTTCACC 3271 Query 25878 TCGACGTTTTACAGACGAATT-AATGCAGGTGATCGAAAAGGTGCCTGCGAAGCTATTCG 25936 || ||||| ||| | | |||| ||||| || |||| | ||||||||| ||| ||| Sbjct 3272 TCAACGTTCTACCG-CAAATTGAATGCCGGCGATCTCATTGGTGCCTGCAAAGAGATTAA 3330 Query 25937 CTGGTGGATTAAGGACGGTGGCAGAGACTGCCGTATTCGTTCAAACAACTGTTACGGTCA 25996 | |||||| |||||| |||| ||| |||||||| || | || ||||||||||| || Sbjct 3331 GCGCTGGATTTGGGACGGAGGCAAAGATTGCCGTATCCGCGCCAATAACTGTTACGGGCA 3390 Query 25997 GGTATCCCGTCGTGACCAGGAG 26018 | || | || |||||||||||| Sbjct 3391 GATAGCGCGGCGTGACCAGGAG 3412 Score = 134 bits (148), Expect = 5e-27 Identities = 131/164 (80%), Gaps = 11/164 (7%) Strand=Plus/Minus Query 60396 TGACTGGTCATGATGACCTCCTTATTTGTTTAGTTT--ATAACCGCCAGTTAGTAGCTGG 60453 ||||| | ||| | | |||||||| | ||||||||| || ||| ||||||||||||| Sbjct 1109 TGACTTGGCATAAAG-CCTCCTTACTAGTTTAGTTTCGATTACC---AGTTAGTAGCTGG 1054 Query 60454 CGGTCGGGTGTCAACTGAGCCAAATAAGAAGCTCTGGGCATATT-CCCTTGCGGGTGTTG 60512 | |||| |||||||||| | | |||| | ||||||||||||| |||||||| || ||| Sbjct 1053 TAGCCGGGCGTCAACTGAGTCTAGTAAGCAACTCTGGGCATATTCCCCTTGCGAGTATTG 994 Query 60513 TATTACGCCTCTCCACCCGACCTTTGTACGGATGTAACTATGCC 60556 ||||||||||||||||||| |||| ||||||| | || ||| Sbjct 993 TATTACGCCTCTCCACCCGGCCTT----CGGATGTGATTACGCC 954 >seq3892 Length=6556 Score = 147 bits (162), Expect = 9e-31 Identities = 225/312 (72%), Gaps = 14/312 (4%) Strand=Plus/Minus Query 60093 TTCTTTTCGCACTCGATGAAGTATCTGCGTATCTGTCGGCCTTTTTCGTTACGCTCTACC 60152 ||||| || || ||||||||||| | || | ||| ||||||| ||||| ||||| ||| Sbjct 3490 TTCTTCTCACATTCGATGAAGTAGCGTCGCACCTGACGGCCTTGCTCGTTGCGCTCAACC 3431 Query 60153 ATCGCCGTTTCTTTGGCTGTATCGAGGGTAAGGTGGTAGTCTTTTTTCCCTCGCCCATAA 60212 |||||| |||||| || || |||||||| || |||||||| ||| | | ||||| | Sbjct 3430 ATCGCCAGTTCTTTAGCAGTGTCGAGGGTGAGCTGGTAGTCCTTTCTGCGACGCCC--GA 3373 Query 60213 CCTATTTC-CCGTTTCTGG-GAAATAGCTATATAGTCCTGATTTTCAACGAATCCGTACT 60270 | |||| ||| ||||| |||| | || ||||| ||||| | || ||||||| Sbjct 3372 CAGTTTTCGCCGAATCTGGCGAAAATACGATGTAGTCTAGATTTGCGGTAAACCCGTACT 3313 Query 60271 CTTCAATACGTTCTGTAATCCACGATGCAAA----GCGTTTACCTAC-TCCAAGAAAAGT 60325 || ||| || || |||||| | || ||| ||| ||||| | ||| |||||| Sbjct 3312 CTGAAATTCGCTCACGAATCCA-GTTGGAAAAGTCGCG---GCCTACATTCAA-AAAAGT 3258 Query 60326 ATGTAAATCACGGGCATTAACGAGAAGAGTGGTTTCGTTGGCGATAGTGCCGTTGAATAC 60385 ||| | ||| || |||||| |||||| ||| ||||| || || ||||| || || || Sbjct 3257 ATGAAGATCGCGAGCATTACAAAGAAGAATGGAATCGTTTGCAATGGTGCCATTAAAAAC 3198 Query 60386 GGGGATGAGTTG 60397 |||||||| || Sbjct 3197 AGGGATGAGCTG 3186 >seq6242 Length=2873 Score = 116 bits (128), Expect = 1e-21 Identities = 223/323 (69%), Gaps = 13/323 (4%) Strand=Plus/Minus Query 18263 AGCATTGAAATCGCTGAGTTGGTGGGAAGCCGTCATGACAAGGTGAAACAATCCATTGAA 18322 ||| | || ||| | || ||||| || || ||||| ||||| | ||||| || |||||| Sbjct 639 AGCCTCGACATCACGGAATTGGTTGGTAGTCGTCACGACAAACTTAAACAGTCTATTGAA 580 Query 18323 CGACTGGCGGTTCGAGGTGTGATCCGAAATCCCCCAATGGTGGTTTTCGAAAA-AATCAA 18381 || |||||| || || || | | |||| |||||| | | || || || ||| Sbjct 579 AGATTGGCGGAGAAGGGAGTAATTCAACTTCCCTCAATGGAGAAAGTTGAGAATAAACAA 520 Query 18382 TAACTTAGG-ATTACTTCGTGGCGTAGAGGCTTACGTTTTTGAGGGCGAACAAGGTAAGC 18440 || ||| | || ||| | ||||||||| ||||||||| ||||||||||||| Sbjct 519 TAGAATAGCCACAAC--CGTTTTATGGAGGCTTACCATTTTGAGGGTGAACAAGGTAAGC 462 Query 18441 GCGACAGCATTATTGTCGTTGCCCAGTTGTCGCCGGAATTCACCGCTCGCCTTGTTGACC 18500 | |||||||| ||||| || ||||| | || || ||||| ||||| | | || || | Sbjct 461 GTGACAGCATCATTGTTGTCGCCCAACTTTCCCCCGAATTTACCGCCAGATTAGTAGATC 402 Query 18501 GCTGGCGAGAACTCG--AAGGGGCAACCGCGAAAA-----TACCACAAACCTTTTCTGAG 18553 | |||| ||||| | || |||| |||||| |||| |||||||| || || Sbjct 401 GTTGGCAGGAACTGGAAAATACTCAAC--CGAAAATCCGGTACCTCAAACCTTCTCAGAA 344 Query 18554 GCATTGCGCCTTGCGGCCGACCT 18576 ||||| || || ||||| || Sbjct 343 GCATTAATGCTCGCCGCCGAACT 321 >seq4809 Length=3389 Score = 105 bits (116), Expect = 3e-18 Identities = 244/363 (67%), Gaps = 10/363 (3%) Strand=Plus/Plus Query 16441 TCAAATCAAATACGCCAGCACACGACAAGGACTGCTGGCAAACGCCGCTTTGGCTTTTTG 16500 |||||||| | || | || | |||||||| |||| ||| |||| | | ||| Sbjct 71 TCAAATCACACACCAGACCAGAGCACAAGGACACATGGCGAACCCCGCCCGAGGTCTTTC 130 Query 16501 ATGCACTGGATATTGAGTTTGGATTCTGGCTGGATTCGGCAGCGAGCGACAAAAATGCTC 16560 | || |||||| |||||||| |||| || ||| | || ||| | || | ||| | | Sbjct 131 AGGCGCTGGATGCGGAGTTTGGCTTCTACCTCGATGCCGCCGCGGACCACGACAATACCC 190 Query 16561 TGTGCGCTCACTGGCTAACTGAGGCC----GACGACGCGCTCAATTCTGAGTGGGTAAGC 16616 |||| || || || |||| ||| || || || || | ||| ||| ||| Sbjct 191 TGTGTCGTC--TG--TATCTGACGCCAGAGGATGATGCCCTTGCCTGTGACTGGAGTAGC 246 Query 16617 CACGGTGCAATCTGGAATAACCCACCGTACAGCAATATCAGGCCGTGGGTGGAAAAAGCC 16676 ||| || |||| || || ||||||||||||||| | || ||||| || ||||| Sbjct 247 ACCGGCGCCATCTTCTGCAATCCCCCGTACAGCAATATCCGCCCCTGGGTTGATAAAGCT 306 Query 16677 GCTGAGCAGTGCATACAACAGCGACAGACGGTAGTTATGCTTGTGCCAGAGGATATGTCA 16736 ||||||||| || | ||| | ||||| |||||||| |||| | ||||| || Sbjct 307 GCTGAGCAGAGCCGCAAGCAGAATAAAACGGTCGTTATGCTGCTGCCTGCGGATACCTCG 366 Query 16737 GTCGGATGGTTCAGCA-AGGCTCTGGAGAGTGTTGACGAAGTTCGCATCATCACTGATGG 16795 ||||||||| ||| ||||| | | | ||||| || || ||| ||||||| || || Sbjct 367 ACGGGATGGTTC-GCACTGGCTCAGAAAACGGTTGATGAGGTGCGCTTCATCACCGAAGG 425 Query 16796 ACG 16798 || Sbjct 426 GCG 428 >seq1577 Length=31499 Score = 102 bits (112), Expect = 3e-17 Identities = 220/327 (67%), Gaps = 14/327 (4%) Strand=Plus/Plus Query 60093 TTCTTTTCGCACTCGATGAAGTATCTGCGTATCTGTCGGCCTTTTTCGTTACGCTCTACC 60152 ||||| || || ||||||||||| | || | ||| ||||||| ||||| ||||| ||| Sbjct 21929 TTCTTCTCACATTCGATGAAGTAGCGTCGCACCTGACGGCCTTGCTCGTTGCGCTCAACC 21988 Query 60153 ATCGCCGTTTCTTTGGCTGTATCGAGGGTAAGGTGGTAGT-CTTTTTTC----------- 60200 |||||| ||||| ||||| | ||||| || ||||||| ||| ||| Sbjct 21989 ATCGCCAGCTCTTTTGCTGTGTTCAGGGTGAGATGGTAGTCCTTGCTTCTTCTATCTCCA 22048 Query 60201 CCTCGCCCATAACCTATTTCCCGTTTCTGGGAAATAGCTATATAGTCCTGATTTTCAACG 60260 ||||| || ||| ||| | || || || |||||| ||||| | | Sbjct 22049 CCTCGTGTATTTTTGATTCCCCCACTTTGATGAACCAAAATGTAGTCCGCGTTTTCGATG 22108 Query 60261 AATCCGTACTCTTCAATAC-GTTCTGTAATCCACGATGCAAAGCGTTTACCTACTCCAAG 60319 ||||||||||| || | ||||| ||||||| | || ||| | || | || Sbjct 22109 AATCCGTACTCGGTAACGCGGTTCT-TAATCCATGTTGAAAAATCACGGCGAACATCGAG 22167 Query 60320 AAAAGTATGTAAATCACGGGCATTAACGAGAAGAGTGGTTTCGTTGGCGATAGTGCCGTT 60379 || ||| | | ||| |||| | || ||||| | |||||||| ||||||||||| Sbjct 22168 GAATTCATGCAGCTTACGCGCATCACACAGTAGAGTTGCTTCGTTGGAAATAGTGCCGTT 22227 Query 60380 GAATACGGGGATGAGTTGACTGGTCAT 60406 ||| |||||||| || ||| ||||||| Sbjct 22228 GAAAACGGGGATAAGCTGATTGGTCAT 22254 >seq5862 Length=3465 Score = 98.7 bits (108), Expect = 4e-16 Identities = 228/339 (67%), Gaps = 10/339 (3%) Strand=Plus/Plus Query 16465 ACAAGGACTGCTGGCAAACGCCGCTTTGGCTTTTTGATGCACTGGATATTGAGTTTGGAT 16524 |||||||| |||| ||| |||| | | || | || |||||| |||||||| | Sbjct 23 ACAAGGACACATGGCGAACCCCGCACGAGGTCTTCCAGGCGCTGGATGCGGAGTTTGGCT 82 Query 16525 TCTGGCTGGATTCGGCAGCGAGCGACAAAAATGCTCTGTGCGCTCACTGGCTAACTGAGG 16584 ||| || ||| | || ||| | || | ||| | ||||| || || || |||| | Sbjct 83 TCTACCTCGATGCCGCCGCGGACCACGACAATACCCTGTGTCGTC--TG--TATCTGACG 138 Query 16585 CC----GACGACGCGCTCAATTCTGAGTGGGTAAGCCACGGTGCAATCTGGAATAACCCA 16640 || || || || || | ||| ||| ||| ||| || |||| || || Sbjct 139 CCAGAGGATGATGCCCTTGCCTGTGACTGGAGTAGCACCGGCGCCATCTTCTGCAATCCC 198 Query 16641 CCGTACAGCAATATCAGGCCGTGGGTGGAAAAAGCCGCTGAGCAGTGCATACAACAGCGA 16700 ||||||||||||||| | || ||||| || ||||| ||||||||| || | ||| Sbjct 199 CCGTACAGCAATATCCGCCCCTGGGTTGATAAAGCTGCTGAGCAGAGCCGCAAGCAGAAT 258 Query 16701 CAGACGGTAGTTATGCTTGTGCCAGAGGATATGTCAGTCGGATGGTTCAGCA-AGGCTCT 16759 | ||||| |||||||| |||| | ||||| || ||||||||| ||| |||| | Sbjct 259 AAAACGGTCGTTATGCTGCTGCCTGCGGATACCTCGACGGGATGGTTC-GCACAGGCACA 317 Query 16760 GGAGAGTGTTGACGAAGTTCGCATCATCACTGATGGACG 16798 | | | ||||| || || ||| ||||||| || || || Sbjct 318 GAAAACGGTTGATGAGGTGCGCTTCATCACCGAAGGGCG 356 >seq4482 Length=5216 Score = 91.5 bits (100), Expect = 6e-14 Identities = 180/254 (71%), Gaps = 18/254 (7%) Strand=Plus/Minus Query 17183 GCAAAATCTGGCGTCGGGATTGGCGTCCTGGATA-GAGACCGCGACAGATACACGCCGCG 17241 ||||| || || | |||| || || || | || || ||||||||| |||||||||| Sbjct 1863 GCAAATTCAGGTGCCGGGCTTTGCACCCCGATTATGAAACCGCGACAACAACACGCCGCG 1804 Query 17242 AGCGTGTTTTTTATTGTCGTATGCACGCGCACATCTGAATTATGGTGGGCTGTGTGGGG- 17300 |||||||||||| ||| | || | || | ||||| |||||||||||| ||||| Sbjct 1803 AGCGTGTTTTTTGTTGCC---TGAAAGC-CCCATCT---CTATGGTGGGCTGGATGGGGC 1751 Query 17301 -GCGGAGAGATCCGCGCCGGTCGGTTTC-CCGGTTACGCCAACCCTGCACAGTTCACCAC 17358 || |||| ||||| ||||||| ||||| || ||||||| ||||||||||| Sbjct 1750 AATCGAAAGAT--TGGCCGGGCGGTTTCTCCGGTAGTGCAAACCCTGTTCAGTTCACCAC 1693 Query 17359 C-AGACGA--TTGGCGTC-GTCGGTGGTGA-GTTATTAAGAAACCACCAGAGGGCGTCAT 17413 | | | || || || | | |||||||| | |||||||||| |||| ||| Sbjct 1692 CAATATGAGTTTTGCACCTCTTGGTGGTGATAACACAAAGAAACCACTGGAGGTTGTCGC 1633 Query 17414 TATGACAACTCAAA 17427 ||||||| ||||| Sbjct 1632 TATGACACTTCAAA 1619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194854527560976