Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq33 98.7 1e-15 >seq33 Length=2490231 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 16224 CTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCT 16283 |||| ||||| || | ||| ||| ||||| | |||||||||| ||||| ||||| Sbjct 182650 CTTCATCTCTAGAAATCAATTCATTGCTGAAAGTAAGCCCTGGCATTAATCCTCTTTTCT 182591 Query 16284 TTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAG 16343 ||||||| ||||| || ||||| || || || |||| || || |||| ||||||| Sbjct 182590 TTAACCAAAATATAGCCGCAAAGCTACCAGAGAAAAATACGCCTTCCACAGCAGCAAAAG 182531 Query 16344 CGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGA-ATCCATTTCTGTACCCATTCG 16402 | || | || ||| || | || ||| ||| | || ||||||| | |||| || Sbjct 182530 CAATAATTCTTTCTGCAAAAGTGGCAGTCTTA-GAGGAGATCCATTCCAAAGCCCAGTCA 182472 Query 16403 GCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAA 16443 ||||||| || | |||||||| || || || || ||||| Sbjct 182471 GCTTTTTTCTTCACACAATCCAGAGTCTCAATTGCATTAAA 182431 Score = 91.5 bits (100), Expect = 2e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 ||||| ||||| || |||||||||||||| || ||||| | || || || || || || Sbjct 181687 ATATAAGTATCTATGAGTAAACTGTACATCTCAGAGTGAACATTTTCCATTGCAATTTGG 181628 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 || || || || |||| || || | || ||| ||||| ||| | || | | | Sbjct 181627 AAACCGTAAAAACATCTTGCTTCAGTTACTTGAACTTCTTGACTAAACCTCTCAACTAAG 181568 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATAT 16651 || ||||| || || || ||| |||||||| || ||||||| || ||| |||| | Sbjct 181567 TTTTCATTAACAATTCCATCAGAGGCAGCAAAGAAAGCCAATACATGAGAAATAAAATGT 181508 Query 16652 TTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAATC 16689 ||||| |||| | | | || ||||| | |||||| Sbjct 181507 TTTTCTTCAGGTTTCAACCTAGTCCAATGATCTAAATC 181470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511308684250840