Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq57 100 2e-16
>seq57
Length=2082711
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
||||||||||||||||| || || || | || ||| || | || |||| ||| || ||
Sbjct 1620467 GTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTCCAACTGCTTTCCA 1620526
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
||| ||||||| | |||||| || || | |||||||| || ||| || |||
Sbjct 1620527 GCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTGGATTTTGGCTTTT 1620586
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | | ||||||| ||||||| ||| | ||||| || || || || | |||
Sbjct 1620587 ACATTTTCAATAGTATCAGAGGGCTCCACTTCAAGAGTAATTGTTTTTCCAGTCAGAGTT 1620646
Query 21159 TTGACAAATATTTGCATT 21176
|| ||||| |||||||||
Sbjct 1620647 TTCACAAAAATTTGCATT 1620664
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004
|||||| || |||| || || || | ||| ||||| || ||||| ||||| ||||| ||
Sbjct 1618609 GTTTCCGCCACGCAATCTCAGTACTAGATGTAAAGTTGATTCCTTCTGAATATTATAATC 1618668
Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064
| || ||| | | || |||| ||||| || || |||| | || ||||||||
Sbjct 1618669 TGACAAGGTGCGACCATCTTCCAATTGTTTCCCTGCGAAAATCAACCTTTGCTGGTCAGG 1618728
Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124
|| | ||||||||||| || || |||||| | | | ||| ||| || ||
Sbjct 1618729 TGGTATTCCTTCCTTGTCTTGAATTTTCGCTTTCACATTTTCAATAGTGTCAGATGGTTC 1618788
Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
||| | |||||||| || || || || ||||| ||||||||||||||
Sbjct 1618789 AACTTCAAGAGTAATGGTTTTTCCAGTCAAAGTTTTCACAAATATTTGCAT 1618839
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
||||||||||||||||| || || || | || ||| || | || |||| ||| || ||
Sbjct 1619099 GTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTCCAACTGCTTTCCA 1619158
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
||| ||||||| | |||||| || || | |||||||| || ||| || |||
Sbjct 1619159 GCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTGGATTTTGGCTTTA 1619218
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | | ||||||| |||||| ||| | ||||| || || || || | |||
Sbjct 1619219 ACATTTTCAATAGTATCAGAGGGCTCAACTTCAAGAGTAATTGTTTTTCCAGTCAGAGTT 1619278
Query 21159 TTGACAAATATTTGCATT 21176
|| || || |||||||||
Sbjct 1619279 TTCACGAAAATTTGCATT 1619296
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| |||| ||||| || || | ||| ||||| || || || || || || ||||| |
Sbjct 1619751 TTCCTCCTCTAAGCCTTAGTACAAGATGTAAAGTAGATTCTTTCTGGATATTGTAGTCAG 1619810
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
||| || | | || |||| ||| ||||| ||| | || | |||||| || || |
Sbjct 1619811 ACAGAGTGCGACCATCTTCCAACTGCTTGCCTGCAAAGATCAATCTCTGTTGATCTGGTG 1619870
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | ||||| || || || || |||||| | | | || ||| || |||
Sbjct 1619871 GAATACCTTCTTTATCTTGAATTTTAGCTTTCACATTTTCTATCGTGTCAGACGGTTCCA 1619930
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
||| | |||||||||||| || ||||| || || |||||||| ||||||
Sbjct 1619931 CTTCTAAGGTAATGGTCTTTCCAGTTAAGGTCTTAACAAATATCTGCATT 1619980
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| ||||| || || || || | |||||| || ||||| || ||||||||||| || |
Sbjct 1618841 CCTCCTCGAAGTCTAAGGACAAGATGCAATGTTGACTCTTTCTGAATGTTATAATCAGAA 1618900
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| ||| | | || |||| |||||| || || |||| | || ||||| || ||
Sbjct 1618901 AGAGTTCGACCATCTTCCAACTGTTTCCCAGCGAAAATCAACCTTTGCTGATCGGGAGGG 1618960
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||||| || ||||| ||| || | | | |||||| || || |
Sbjct 1618961 ATTCCTTCCTTATCTTGAATCTTAGCTTTTACATTTTCAATTGTATCAGAAGGTTCTACT 1619020
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | |||||| || || || ||||| ||||| || ||||| |||||
Sbjct 1619021 TCTAAGGTAATCGTTTTTCCTGTTAAAGTTTTCACGAATATCTGCAT 1619067
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| |||| || | || |||| |||||| |||||||| || || || || || || |
Sbjct 1620207 TTCCACCTCTGAGACGAAGAACCAAATGCAACGTGGACTCTTTCTGTATATTGTAATCAG 1620266
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
||| || | | || |||| ||| ||||| ||| | || | ||||| || || |
Sbjct 1620267 ACAGTGTGCGACCATCTTCCAACTGCTTGCCTGCAAAGATCAACCTCTGTTGATCTGGTG 1620326
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | ||||| || || || || |||||| | | | |||||| || ||
Sbjct 1620327 GAATACCTTCTTTATCTTGAATTTTAGCTTTCACATTTTCAATTGTATCAGATGGTTCTA 1620386
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
||| | ||| ||||| || ||||||||||||||||| ||||| |||||
Sbjct 1620387 CTTCTAAGGTGATGGTTTTTCCGGTTAACGTTTTGACGAATATCTGCAT 1620435
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
||||||| |||| || |||| ||| | ||||||||||||||||| || || || |
Sbjct 1619525 CCCCCTCTGAGCCGAAGAACCAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGAT 1619584
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| ||| || | || || | ||| || || ||| ||||||| | |||||| || ||
Sbjct 1619585 AGAGTTCGGCCATCTTCTAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGA 1619644
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||| || || ||| || || || | | | |||||| ||||| |
Sbjct 1619645 ATTCCTTCTTTATCCTGGATTTTAGCCTTTACGTTCTCTATTGTATCAGACGGCTCAACT 1619704
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
|| | ||||| || || || || | ||||| ||||| |||||||||
Sbjct 1619705 TCAAGAGTAATAGTTTTTCCAGTCAGAGTTTTCACAAAAATTTGCATT 1619752
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422174095901492
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |