Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq57 98.7 1e-15 seq504 95.1 1e-14 >seq57 Length=2082711 Score = 98.7 bits (108), Expect = 1e-15 Identities = 148/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || |||||||||||| | ||||| || || || || | || || || | Sbjct 1621350 AAAATGCAGATCTTCGTAAAAACGTTGACGGGGAAGACAATAACTCTTGAAGTTGAGCCT 1621291 Query 40747 ACCGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | || | || ||||| | |||| ||||||| || || || || ||||| | || Sbjct 1621290 TCAGATACTATTGAAAACG-TAAAGGCTAAAATTCAAGATAAGGAAGGAATCCCTCCTGA 1621232 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||||||||| | || | || || || ||| |||| || | || ||||| ||| || Sbjct 1621231 TCAGCAACGATTAATTTTTGCTGGAAAGCAGTTGGAAGATGGTCGTACCCTATCCGATTA 1621172 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCAT 40893 ||| || ||||||||| ||||| ||||| Sbjct 1621171 CAATATACAGAAGGAGTCCACGTTGCAT 1621144 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| |||||||| |||||| | || || |||||||||||| | || || ||| | | Sbjct 1620435 ATGCAGATATTCGTCAAAACGTTAACCGGAAAAACCATCACCTTAGAAGTAGAACCATCT 1620376 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | ||| | || | ||||||| || ||||| || || || | || || Sbjct 1620375 GATACAATTGAAAATGTGAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACCAGATCAA 1620316 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| || ||||| ||| |||| || | ||||| || || ||||| Sbjct 1620315 CAGAGGTTGATCTTTGCAGGCAAGCAGTTGGAAGATGGTCGCACACTGTCTGATTACAAT 1620256 Query 40870 ATCCAGAAGGAGGCCACGCTGCAT 40893 || ||||| ||| ||||| ||||| Sbjct 1620255 ATACAGAAAGAGTCCACGTTGCAT 1620232 >seq504 Length=327254 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||| |||||||| || || ||||| | ||||| ||||| || ||| | || || ||| | Sbjct 214297 AAATATGCAAATTTTTGTGAAAACTTTGACGGGTAAAACAATTACCCTTGAGGTTGAACC 214238 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | | |||| | ||| | |||| ||| || | || ||||| || || || | || Sbjct 214237 CTCAGACACAATTGAAAATGTTAAGGCAAAGATCCAAGATAAAGAAGGAATTCCTCCAGA 214178 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || | || | || ||||||||||| || || | |||||||| ||| || Sbjct 214177 TCAGCAAAGATTGATTTTTGCTGGCAAACAGCTAGAAGATGGACGCACCCTTTCCGATTA 214118 Query 40866 CAACATCCAGAA 40877 ||| |||||||| Sbjct 214117 CAATATCCAGAA 214106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515112697751120