Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq57 104 2e-17 >seq57 Length=2082711 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| |||||||| |||||||| | ||| || ||| || | ||| |||||| Sbjct 1619099 GTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTCCAACTGCTTTCCA 1619158 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || | || |||||||||||||| || || || || ||||| || ||||| |||| Sbjct 1619159 GCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTGGATTTTGGCTTTA 1619218 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | ||| | || || | | ||| || || | || | ||||| || ||||||||| Sbjct 1619219 ACATTTTCAATAGTATCAGAGGGCTCAACTTCAAGAGTAATTGTTTTTCCAGTCAGAGTT 1619278 Query 118722 TTTACAAAAATCTGCAT 118738 || || ||||| ||||| Sbjct 1619279 TTCACGAAAATTTGCAT 1619295 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| |||||||| |||||||| | ||| || ||| || | ||| |||||| Sbjct 1620467 GTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTCCAACTGCTTTCCA 1620526 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || | || |||||||||||||| || || || || ||||| || ||||| ||| Sbjct 1620527 GCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTGGATTTTGGCTTTT 1620586 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | ||| | || || | | ||| || || | || | ||||| || ||||||||| Sbjct 1620587 ACATTTTCAATAGTATCAGAGGGCTCCACTTCAAGAGTAATTGTTTTTCCAGTCAGAGTT 1620646 Query 118722 TTTACAAAAATCTGCAT 118738 || |||||||| ||||| Sbjct 1620647 TTCACAAAAATTTGCAT 1620663 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| || | ||| | || | || | ||| |||||||| |||||||| ||||| Sbjct 1618839 TACCTCCTCGAAGTCTAAGGACAAGATGCAATGTTGACTCTTTCTGAATGTTATAATCAG 1618898 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || ||| || | |||||| |||||| | || | | ||||||||||||| Sbjct 1618899 AAAGAGTTCGACCATCTTCCAACTGTTTCCCAGCGAAAATCAACCTTTGCTGATCGGGAG 1618958 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||| ||| ||| || ||| || | ||| | || || | || | Sbjct 1618959 GGATTCCTTCCTTATCTTGAATCTTAGCTTTTACATTTTCAATTGTATCAGAAGGTTCTA 1619018 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | ||| | |||||| || || | |||||| || || |||||||| Sbjct 1619019 CTTCTAAGGTAATCGTTTTTCCTGTTAAAGTTTTCACGAATATCTGCAT 1619067 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | || ||||| |||||||| |||||||| | ||| || ||| || Sbjct 1619543 ACCAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTCT 1619602 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 | ||| |||||||| | || |||||||||||||| || || || || || || || Sbjct 1619603 AACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGAATTCCTTCTTTATCCTGG 1619662 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 ||||| || || | || | || || | ||| || || | || | ||||| Sbjct 1619663 ATTTTAGCCTTTACGTTCTCTATTGTATCAGACGGCTCAACTTCAAGAGTAATAGTTTTT 1619722 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||||||||| |||||||| ||||| Sbjct 1619723 CCAGTCAGAGTTTTCACAAAAATTTGCAT 1619751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433742963787604