Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq57 89.7 3e-13
>seq57
Length=2082711
Score = 89.7 bits (98), Expect = 3e-13
Identities = 161/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
|||||| |||| ||||| || || |||||||| ||| ||||| || || || || ||
Sbjct 1618612 TCCGCCACGCAATCTCAGTACTAGATGTAAAGTTGATTCCTTCTGAATATTATAATCTGA 1618671
Query 34222 CA-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGG 34280
|| | || || | || ||||| || || ||||||||||| | || |||||||| |
Sbjct 1618672 CAAGGTG-CGACCATCTTCCAATTGTTTCCCTGCGAAAATCAACCTTTGCTGGTCAGGTG 1618730
Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCG 34339
| | | |||||||| || ||| ||||| | || | || | || | | |||
Sbjct 1618731 GTATTCCTTCCTTGTCTTGAAT-TTTCGCTTTCACATTTTCAATAGTGTCAGATGGTTCA 1618789
Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || | || |||||||| || || | |||||||||||| || |||||
Sbjct 1618790 ACTTCAAGAGTAATGGTTTTTCCAGTCAAAGTTTTCACAAATATTTGCAT 1618839
Score = 86.0 bits (94), Expect = 4e-12
Identities = 152/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 34172 AGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGG 34231
||||| || || || ||||||||| ||||||||| || |||||||| ||||| ||
Sbjct 1619762 AGCCTTAGTACAAGATGTAAAGTAGATTCTTTCTGGATATTGTAGTCAGACAGAGTGCGA 1619821
Query 34232 TCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCC 34291
| || ||||||||||||||||| || || | | ||| || || || | | ||
Sbjct 1619822 CCATCTTCCAACTGCTTGCCTGCAAAGATCAATCTCTGTTGATCTGGTGGAATACCTTCT 1619881
Query 34292 TTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGT 34350
|| || || ||| ||||| | || |||||| || | || ||| || || | ||
Sbjct 1619882 TTATCTTGAAT-TTTAGCTTTCACATTTTCTATCGTGTCAGACGGTTCCACTTCTAAGGT 1619940
Query 34351 GATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||||| || || || | || || ||||| ||||||||
Sbjct 1619941 AATGGTCTTTCCAGTTAAGGTCTTAACAAATATCTGCAT 1619979
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323006886554720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |