Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq57 89.7 3e-13 >seq57 Length=2082711 Score = 89.7 bits (98), Expect = 3e-13 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 |||||| |||| ||||| || || |||||||| ||| ||||| || || || || || Sbjct 1618612 TCCGCCACGCAATCTCAGTACTAGATGTAAAGTTGATTCCTTCTGAATATTATAATCTGA 1618671 Query 34222 CA-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGG 34280 || | || || | || ||||| || || ||||||||||| | || |||||||| | Sbjct 1618672 CAAGGTG-CGACCATCTTCCAATTGTTTCCCTGCGAAAATCAACCTTTGCTGGTCAGGTG 1618730 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCG 34339 | | | |||||||| || ||| ||||| | || | || | || | | ||| Sbjct 1618731 GTATTCCTTCCTTGTCTTGAAT-TTTCGCTTTCACATTTTCAATAGTGTCAGATGGTTCA 1618789 Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || | || |||||||| || || | |||||||||||| || ||||| Sbjct 1618790 ACTTCAAGAGTAATGGTTTTTCCAGTCAAAGTTTTCACAAATATTTGCAT 1618839 Score = 86.0 bits (94), Expect = 4e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34172 AGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGG 34231 ||||| || || || ||||||||| ||||||||| || |||||||| ||||| || Sbjct 1619762 AGCCTTAGTACAAGATGTAAAGTAGATTCTTTCTGGATATTGTAGTCAGACAGAGTGCGA 1619821 Query 34232 TCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCC 34291 | || ||||||||||||||||| || || | | ||| || || || | | || Sbjct 1619822 CCATCTTCCAACTGCTTGCCTGCAAAGATCAATCTCTGTTGATCTGGTGGAATACCTTCT 1619881 Query 34292 TTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGT 34350 || || || ||| ||||| | || |||||| || | || ||| || || | || Sbjct 1619882 TTATCTTGAAT-TTTAGCTTTCACATTTTCTATCGTGTCAGACGGTTCCACTTCTAAGGT 1619940 Query 34351 GATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| || || || | || || ||||| |||||||| Sbjct 1619941 AATGGTCTTTCCAGTTAAGGTCTTAACAAATATCTGCAT 1619979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323006886554720