Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_002730.1 Length=38297 Score E Sequences producing significant alignments: (Bits) Value seq1206 482 6e-132 seq8456 179 9e-41 seq4809 84.2 5e-12 >seq1206 Length=31275 Score = 482 bits (534), Expect = 6e-132 Identities = 972/1432 (68%), Gaps = 10/1432 (1%) Strand=Plus/Plus Query 26516 ATGCCTATTCAGCAACTTCCGCTTATGAAAGGTGTCGGCAAAGACTTTCGAAACGCGGAC 26575 ||||| || || |||||||| || || || || || || ||| |||| || |||| ||| Sbjct 25841 ATGCCGATACAACAACTTCCCCTGATTAAGGGCGTTGGAAAAAACTTCCGGGACGCTGAC 25900 Query 26576 TATATCGACTATCTGCCAGTGAATATGCTGGCTACACCCAAAGAAATCCTGAACAGCAGC 26635 ||| | || || || || |||||| |||| ||||||| || | |||||||||||| Sbjct 25901 TATGTTGATCTGCTTCCGGTCAATATGTTGGCGACACCCAGGCAAGTGCTGAACAGCAGC 25960 Query 26636 GGATATCTTCGCTCATTCCCTGGCATTGCCAAACGTTCTGACGTGAACGGTGTATCTCGC 26695 |||||| | ||||||||||| ||||| | ||| || || || || ||| |||| || Sbjct 25961 GGATATTTGCGCTCATTCCCCGGCATAGACAAGCGATCGGATGTTGCAGGTATATCGCGT 26020 Query 26696 GGCGTCGAGTACAACATGGCGCAGAATGCTGTTTATCGCGTGTGTGGTGGCAAGCTGTAC 26755 |||| || ||||| || |||||||| || |||||||| ||||| || | ||||| Sbjct 26021 GGCGCAATGTTCAACACTGCTCAGAATGCCGTATATCGCGTTTGTGGAGGTAGTCTGTAT 26080 Query 26756 AAAGGAGAAAGTGAAGTCGGTGATGTTGCC-GGAAGTGGTCGTGTATCAATGGCGCATGG 26814 || | | || ||| |||| | || ||||||||| | ||||||||| | Sbjct 26081 CGTGGCGCGTCGGTGGTTGGTTC-GTTGTCTGGCTCTGGTCGTGTGCCGATGGCGCATAG 26139 Query 26815 TCGGACATCTCAGGCTGTAGGCGTTAATGGCCAACTGGTCGAGTATCGTTATGATGGCAC 26874 || | |||||||| || ||| || || | || | ||| | || |||||||| Sbjct 26140 CCGCAACTCTCAGGCGGTGATCGTCGGCGGTCAGGTTGTGCAATATGGCTACGATGGCAC 26199 Query 26875 GGTTAAAACAGTCTCAAACTGGCCTACAGACAGCGGATTCACGCAGTATGAGTTAGGTTC 26934 ||| ||||| || | ||||||||| | || || |||||||||| || | || || Sbjct 26200 GGTGAAAACTGTTGCTAACTGGCCTGTATCGAGTGGCACCACGCAGTATCAGCTGGGCTC 26259 Query 26935 TGTTCGTGACATTACGCGCTTACGCGGGCGTTATGCGTGGTCAAAAGACGGCACTGATTC 26994 ||||| || | | |||||| || | |||||| ||||| || |||||||| Sbjct 26260 ATCGCGTGATATCTGCTGGTCACGCGGTAACTACGTGTGGTCGAAAGATGGGACTGATTC 26319 Query 26995 ATGGTTTATCACTGACCTTGAAGACGAATCGCATCCTGACCGATACAGCGCACAATATCG 27054 | || ||| |||| | || || || | ||| || |||| | || |||| || Sbjct 26320 GTTTTTCATCTCTGATTTGGATGATGAGGCTTTTCCCGATAAATACCGTGCTGAATACCG 26379 Query 27055 TGCCGAGTCTCAGCCTGACGGCATCATCGGCATCGGAACATGGCGAGACTTCATCGTCTG 27114 ||| ||||| || || |||||||| || || | || ||||||| || | | || || Sbjct 26380 TGCGGAGTCACAACCAGACGGCATTATTGGTGTTGGTTCATGGCGTGATATGGTTGTGTG 26439 Query 27115 CTTTGGTTCATCGACGATTGAATATTTCTCCCTGACGGGGGCAACCACCGTT--GGTGCT 27172 ||| || || | |||| ||| ||||| || |||||||| ||| || ||| Sbjct 26440 CTTCGGCACAACCACGACTGAGTATTTTTCTCTGACGGGT--AACTCTGGTGCGGGTCAG 26497 Query 27173 GCTTTGTATGTCGCACAGCCATCGCTGATGGTGCAGAAAGGCATTGCCGGGACTTACTGC 27232 || | || |||| | || || ||||| ||||| || || ||||| | ||| Sbjct 26498 GCGGTATACATCGCTAACCCGGCGTACATGGTCACAAAAGGGATAGCTGGGACGTTTTGC 26557 Query 27233 AAAACGCCGTTTGCTGATTCGTATGCGTTCATCAGCAATCCGGCAACAGGTGCGCCGTCT 27292 || |||||| || | | || | |||||||| ||||||||||| || |||||| Sbjct 26558 AAGTGCCCGTTTATGGACGCATTCGCCATTATCAGCAACCCGGCAACAGGCGCACCGTCT 26617 Query 27293 GTATATATCATCGGCTCCGGTCAGGTGTCACCAATCTCCAGCGCGAGCATTGAGAAAATC 27352 || || | || | ||| ||||||| ||| ||| | || | | |||||||| Sbjct 26618 GTCTACCTGATTGACTCTGGTCAGGCCAAACCCATCGCATCAGCAACGACTGAGAAAACG 26677 Query 27353 CTCCGCTCCTACACCGCTGATGAACTGGCTGATGGCGTGATGGAATCGTTGCGCTTTGAT 27412 || ||| ||||| | ||| || | |||||| ||||| || ||||| || || Sbjct 26678 CTACGCGAATACACTAACGCTGAGCTATCAACTGGCGTCATGGAGTCATTGCGTTTCGAC 26737 Query 27413 GCTCATGAGTTGCTGATTATCCACCTGCCGCGCCACGTCCTAGTATATGACGCATCTTCA 27472 |||| || ||||||||||||||||||| || || || || || | ||| | || Sbjct 26738 TCTCACGAACTGCTGATTATCCACCTGCCACGTCATGTGCTGGTGTTTGATTCGTCGGTG 26797 Query 27473 AGCGCCAATGGTCCGCAATGGTGTGTGTTGAAAACTGGCTTGTATGACGATGTGTACCGC 27532 |||| | ||||| || ||| | ||||||| ||| ||| ||| || |||||||| Sbjct 26798 AGCGAGAGCGGTCCACAGTGGGCCATCCTGAAAACGGGCCTGTTTGATGACGTGTACCGT 26857 Query 27533 GCTATCGACTTCATTTACGAAGGCAATCAGATAACGTGCGGCGATAAGCTGGAATCCGTG 27592 | || || ||| | ||||||||| || || ||||| || ||||||||||| ||| Sbjct 26858 GGGATTGATTTCTTCTACGAAGGCGGCGCTATCACATGCGGTGACAAGCTGGAATCTGTG 26917 Query 27593 ACCGGGAAATTGCAGTTCGATATCAGCAG-CCAGTACGACAAGCAACAGGAACACCTGCT 27651 ||||| | | | || | ||| | | ||| || ||||| |||||||| ||| |||| Sbjct 26918 ACCGGACAGCTTAATTTTG-CATCGTCTGCCCAATATGACAAACAACAGGAGCACTTGCT 26976 Query 27652 GTTTACTCCGTTGTTCAAAGCGGATAACGCCAGAGTTTTCGACCTTGAAGTTGAATCGTC 27711 | | | ||| | |||| ||||| ||||| ||| | |||||||| || ||||| || Sbjct 26977 CTATTCCCCGCTCATCAAGGCGGACAACGCGAGACTGTTCGACCTCGAGCTTGAAGTATC 27036 Query 27712 AACTGGCGTTGCGCAGTACGCTGACCGCCTTTTTCTCTCTGCAACCACTGACGGCATCAA 27771 || |||||||| || | |||||| || || ||| ||||| | |||||||| |||||||| Sbjct 27037 GACGGGCGTTGCTCAATTCGCTGAACGGCTGTTTATCTCTACCACCACTGATGGCATCAA 27096 Query 27772 TTACGGACGTGAGCAGATGATTGAGCAGAATGAACCGTTCGTTTACGACAAACGCGTTTT 27831 ||||| | || || ||| | | ||||| ||||||| || ||| | | | | Sbjct 27097 CTACGGCAGGGAACAAATGGTGCCGTGGAATGCACCGTTCCGCTATGACCAGAGGGCGCT 27156 Query 27832 GTGGAAGCGAGTCGGGCGCATCAGGAAAAATGTTGGCTTCAAATTGCGCGTTATCACGAA 27891 ||| || | ||||| | | ||||| | |||||||| || | |||| || || Sbjct 27157 ATGGCGTCGGATTGGGCGTGTGCGCAAAAACATCGGCTTCAAGTTCAGAATTATTACTAA 27216 Query 27892 GTCACCTGTAACTCTGTC-TGGCTGCCAGATAAGGATTGAGTAATGGCTGAT 27942 || ||||| || || |||| | || | ||| |||||| ||||||||| Sbjct 27217 AAGCCCGGTAACCCTATCAGGGCTACAAG-TGAGGGTTGAGTGATGGCTGAT 27267 Score = 176 bits (194), Expect = 1e-39 Identities = 387/577 (67%), Gaps = 10/577 (2%) Strand=Plus/Minus Query 29492 TGGCTATCTGGTCAGATGAACAACTACCAGAATCTGGCAAATATCGGTCTTGGCGCTCTT 29551 |||||| | || |||||||| || | ||| ||||||| ||||| | || || | Sbjct 29184 TGGCTAGCCGGCCAGATGAATAATGCGAACAATTTGGCAAACATCGGATTGGGAGCATTG 29125 Query 29552 CAGGGGCAGGCAAACGCCGGGCAAACATATGCCAACAACATGAGTCAGATTTCGCAGCAA 29611 || ||||| || ||||| || ||||| || ||||||||| | ||| | | |||||| Sbjct 29124 CAAGGGCAAGCCAACGCAGGTCAAACCTACACCAACAACACTGGGCAGTTATTGCAGCAG 29065 Query 29612 AGTGCGGCTCTTGCAGCGGCAAATGCCAACAGACCATCAGCAATGCAATCTGCTATT--- 29668 | ||||| || || ||||| || || || || ||||| || | || | ||| Sbjct 29064 AACGCGGCGCTCGCCGCGGCCAACGCTAATAGGCCATCGGCGCTACAGCAGGGAATTTCT 29005 Query 29669 GGCGGAGGTGCGTCTGGTGCTATTGCTGGGGCTGGACTTGCGAAATTAATCGGTTCAT-- 29726 |||||| || ||||||| ||||||| | || ||| | | || | ||| Sbjct 29004 GGCGGATTTGG---TGGTGCTCTTGCTGGCGGCGGCATTGTTAG--TGCTCTGGGCATGT 28950 Query 29727 CAACTCCGTGGGGGGCTGCGATCGGCGGCGGTCTTGGTCTGCTTGGCTCGTTGTTTTAAG 29786 | || ||||||||||||| ||||| | || | || | | |||||| | ||||||| Sbjct 28949 CTACGCCGTGGGGGGCTGGTATCGGTGCAGGCATCGGAATTTTAGGCTCGCTATTTTAAG 28890 Query 29787 GGGTAATCATGGCTACGTGGCAACAGGGTATTAATTCTGGTGGTTTTCTGGCTGGCATCG 29846 | || | ||||||||| ||||| ||| |||||| ||||| || |||| | |||| | | Sbjct 28889 GTGTGAACATGGCTACTTGGCAGCAGAATATTAACTCTGGCGGCTTTCCTGGTGGCGTTG 28830 Query 29847 GTACGCAAAATGAGAATGCGCCAAAGGCAAGCGACATTAACGCAACGCTTGGTCTGATCC 29906 || | ||| ||||| ||| | || || || |||||||||||| || ||||| | Sbjct 28829 GTCAGGTAAACACCAATGCACCACAAGCCAGTGATGTTAACGCAACGCCAGGACTGATTC 28770 Query 29907 GCGAAAACAATGAACTGGCTCGCTCAGGTGTAAATAACGTTGGCCTGACCGCGTTACGTG 29966 | | ||||| || | || ||| | || | || || | ||| || || |||| | Sbjct 28769 GACAGAACAACGACTTTGCCCGCGCTGGCGGTAACAATATCGGCTTGCAGGCATTACAGG 28710 Query 29967 GTCTGGCTGGAGTTGCTGATATTTACAATCAGGAACAGCAACAGAAAGCTATTAGTGCGT 30026 | ||| || | ||||| |||||| || || |||| ||||||| | ||| | Sbjct 28709 GGCTGCAAGGGCTGTCTGATGCTTACAAGCAAGACCAGCTACAGAAAACGCAAGCTGCAT 28650 Query 30027 TCAATAAGGTTCACGCTGATGCATGGGCTTCTGGTGA 30063 ||||| ||| | || | |||||| |||||||| Sbjct 28649 TCAATCAGGCCTATGCCAACGCATGGAAATCTGGTGA 28613 >seq8456 Length=1453 Score = 179 bits (198), Expect = 9e-41 Identities = 309/442 (70%), Gaps = 5/442 (1%) Strand=Plus/Plus Query 27503 AAAACTGGCTTGTATGACGATGTGTACCGCGCTATCGACTTCATTTACGAAGGCAATCAG 27562 ||||| ||| ||| ||| || |||||||| | || || ||| | ||||||||| Sbjct 1 AAAACGGGCCTGTTTGATGACGTGTACCGTGGGATTGATTTCTTCTACGAAGGCGGCGCT 60 Query 27563 ATAACGTGCGGCGATAAGCTGGAATCCGTGACCGGGAAATTGCAGTTCGATATCAGCAG- 27621 || || |||| || ||||||||||| |||||||||| | | || | ||| | | Sbjct 61 ATCACATGCGT-GACAAGCTGGAATCTGTGACCGGGACAGCTTAATTTG-CATCGTCTGC 118 Query 27622 CCAGTACGACAAGCAACAGGAACACCTGCTGTTTACTCCGTTGTTCAAAGCGGATAACGC 27681 ||| || ||||| |||||||| ||| |||| | | | ||| | |||| ||||| ||||| Sbjct 119 CCAATATGACAAACAACAGGAGCACTTGCTCTATTCCCCGCTCATCAAGGCGGACAACGC 178 Query 27682 CAGAGTTTTCGACCTTGAAGTTGAATCGTCAACTGGCGTTGCGCAGTACGCTGACCGCCT 27741 ||| | |||||||| || ||||| || || |||||||| || | |||||| || || Sbjct 179 GAGACTGTTCGACCTCGAGCTTGAAGTATCGACGGGCGTTGCTCAATTCGCTGAACGGCT 238 Query 27742 TTTTCTCTCTGCAACCACTGACGGCATCAATTACGGACGTGAGCAGATGATTGAGCAGAA 27801 ||| ||||| | |||||||| |||||||| ||||| | || || ||| | | ||| Sbjct 239 GTTTATCTCTACCACCACTGATGGCATCAACTACGGCAGGGAACAAATGGTGCCGTGGAA 298 Query 27802 TGAACCGTTCGTTTACGACAAACGCGTTTTGTGGAAGCGAGTCGGGCGCATCAGGAAAAA 27861 || ||||||| || ||| | | | | ||| || | ||||| | | ||||| Sbjct 299 TGCACCGTTCCGCTATGACCAGAGGGCGCTATGGCGTCGGATTGGGCGTGTGCGCAAAAA 358 Query 27862 TGTTGGCTTCAAATTGCGCGTTATCACGAAGTCACCTGTAACTCTGTC-TGGCTGCCAGA 27920 | |||||||| || | |||| || || || ||||| || || |||| | || Sbjct 359 CATCGGCTTCAAGTTCAGAATTATTACTAAAAGCCCGGTAACCCTATCAGGGCTACAAG- 417 Query 27921 TAAGGATTGAGTAATGGCTGAT 27942 | ||| |||||| ||||||||| Sbjct 418 TGAGGGTTGAGTGATGGCTGAT 439 >seq4809 Length=3389 Score = 84.2 bits (92), Expect = 5e-12 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 14078 AAAGAAGCGCGCGGCAGAGAATGCCAGGTACGTATTTACGGCGTATGCAATGGTAATCCT 14137 ||||| || | ||| |||| || ||||| | | | || | || || ||||| || Sbjct 597 AAAGAGGCCAGAGGCCGAGAGTGTCAGGTGAGGCTCTCGGGTATCTGTAACGGTAACACT 656 Query 14138 GAAACTACAGTTCTGGCACATTACCGGATGGCTGGAATTTGCGGAACTGGAATGAAGCCT 14197 ||||| ||| ||||| ||||||| ||| | || |||||||| || || ||||||||| Sbjct 657 GAAACCGTAGTGCTGGCCTATTACCGAATGTCCGGCATTTGCGGCACAGGCATGAAGCCT 716 Query 14198 GACGACCTGATCGGTGCATGG 14218 |||||||| | || |||||| Sbjct 717 GACGACCTTTTTGGCGCATGG 737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122404757814846