Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_002730.1
Length=38297
Score E
Sequences producing significant alignments: (Bits) Value
seq1206 482 6e-132
seq8456 179 9e-41
seq4809 84.2 5e-12
>seq1206
Length=31275
Score = 482 bits (534), Expect = 6e-132
Identities = 972/1432 (68%), Gaps = 10/1432 (1%)
Strand=Plus/Plus
Query 26516 ATGCCTATTCAGCAACTTCCGCTTATGAAAGGTGTCGGCAAAGACTTTCGAAACGCGGAC 26575
||||| || || |||||||| || || || || || || ||| |||| || |||| |||
Sbjct 25841 ATGCCGATACAACAACTTCCCCTGATTAAGGGCGTTGGAAAAAACTTCCGGGACGCTGAC 25900
Query 26576 TATATCGACTATCTGCCAGTGAATATGCTGGCTACACCCAAAGAAATCCTGAACAGCAGC 26635
||| | || || || || |||||| |||| ||||||| || | ||||||||||||
Sbjct 25901 TATGTTGATCTGCTTCCGGTCAATATGTTGGCGACACCCAGGCAAGTGCTGAACAGCAGC 25960
Query 26636 GGATATCTTCGCTCATTCCCTGGCATTGCCAAACGTTCTGACGTGAACGGTGTATCTCGC 26695
|||||| | ||||||||||| ||||| | ||| || || || || ||| |||| ||
Sbjct 25961 GGATATTTGCGCTCATTCCCCGGCATAGACAAGCGATCGGATGTTGCAGGTATATCGCGT 26020
Query 26696 GGCGTCGAGTACAACATGGCGCAGAATGCTGTTTATCGCGTGTGTGGTGGCAAGCTGTAC 26755
|||| || ||||| || |||||||| || |||||||| ||||| || | |||||
Sbjct 26021 GGCGCAATGTTCAACACTGCTCAGAATGCCGTATATCGCGTTTGTGGAGGTAGTCTGTAT 26080
Query 26756 AAAGGAGAAAGTGAAGTCGGTGATGTTGCC-GGAAGTGGTCGTGTATCAATGGCGCATGG 26814
|| | | || ||| |||| | || ||||||||| | ||||||||| |
Sbjct 26081 CGTGGCGCGTCGGTGGTTGGTTC-GTTGTCTGGCTCTGGTCGTGTGCCGATGGCGCATAG 26139
Query 26815 TCGGACATCTCAGGCTGTAGGCGTTAATGGCCAACTGGTCGAGTATCGTTATGATGGCAC 26874
|| | |||||||| || ||| || || | || | ||| | || ||||||||
Sbjct 26140 CCGCAACTCTCAGGCGGTGATCGTCGGCGGTCAGGTTGTGCAATATGGCTACGATGGCAC 26199
Query 26875 GGTTAAAACAGTCTCAAACTGGCCTACAGACAGCGGATTCACGCAGTATGAGTTAGGTTC 26934
||| ||||| || | ||||||||| | || || |||||||||| || | || ||
Sbjct 26200 GGTGAAAACTGTTGCTAACTGGCCTGTATCGAGTGGCACCACGCAGTATCAGCTGGGCTC 26259
Query 26935 TGTTCGTGACATTACGCGCTTACGCGGGCGTTATGCGTGGTCAAAAGACGGCACTGATTC 26994
||||| || | | |||||| || | |||||| ||||| || ||||||||
Sbjct 26260 ATCGCGTGATATCTGCTGGTCACGCGGTAACTACGTGTGGTCGAAAGATGGGACTGATTC 26319
Query 26995 ATGGTTTATCACTGACCTTGAAGACGAATCGCATCCTGACCGATACAGCGCACAATATCG 27054
| || ||| |||| | || || || | ||| || |||| | || |||| ||
Sbjct 26320 GTTTTTCATCTCTGATTTGGATGATGAGGCTTTTCCCGATAAATACCGTGCTGAATACCG 26379
Query 27055 TGCCGAGTCTCAGCCTGACGGCATCATCGGCATCGGAACATGGCGAGACTTCATCGTCTG 27114
||| ||||| || || |||||||| || || | || ||||||| || | | || ||
Sbjct 26380 TGCGGAGTCACAACCAGACGGCATTATTGGTGTTGGTTCATGGCGTGATATGGTTGTGTG 26439
Query 27115 CTTTGGTTCATCGACGATTGAATATTTCTCCCTGACGGGGGCAACCACCGTT--GGTGCT 27172
||| || || | |||| ||| ||||| || |||||||| ||| || |||
Sbjct 26440 CTTCGGCACAACCACGACTGAGTATTTTTCTCTGACGGGT--AACTCTGGTGCGGGTCAG 26497
Query 27173 GCTTTGTATGTCGCACAGCCATCGCTGATGGTGCAGAAAGGCATTGCCGGGACTTACTGC 27232
|| | || |||| | || || ||||| ||||| || || ||||| | |||
Sbjct 26498 GCGGTATACATCGCTAACCCGGCGTACATGGTCACAAAAGGGATAGCTGGGACGTTTTGC 26557
Query 27233 AAAACGCCGTTTGCTGATTCGTATGCGTTCATCAGCAATCCGGCAACAGGTGCGCCGTCT 27292
|| |||||| || | | || | |||||||| ||||||||||| || ||||||
Sbjct 26558 AAGTGCCCGTTTATGGACGCATTCGCCATTATCAGCAACCCGGCAACAGGCGCACCGTCT 26617
Query 27293 GTATATATCATCGGCTCCGGTCAGGTGTCACCAATCTCCAGCGCGAGCATTGAGAAAATC 27352
|| || | || | ||| ||||||| ||| ||| | || | | ||||||||
Sbjct 26618 GTCTACCTGATTGACTCTGGTCAGGCCAAACCCATCGCATCAGCAACGACTGAGAAAACG 26677
Query 27353 CTCCGCTCCTACACCGCTGATGAACTGGCTGATGGCGTGATGGAATCGTTGCGCTTTGAT 27412
|| ||| ||||| | ||| || | |||||| ||||| || ||||| || ||
Sbjct 26678 CTACGCGAATACACTAACGCTGAGCTATCAACTGGCGTCATGGAGTCATTGCGTTTCGAC 26737
Query 27413 GCTCATGAGTTGCTGATTATCCACCTGCCGCGCCACGTCCTAGTATATGACGCATCTTCA 27472
|||| || ||||||||||||||||||| || || || || || | ||| | ||
Sbjct 26738 TCTCACGAACTGCTGATTATCCACCTGCCACGTCATGTGCTGGTGTTTGATTCGTCGGTG 26797
Query 27473 AGCGCCAATGGTCCGCAATGGTGTGTGTTGAAAACTGGCTTGTATGACGATGTGTACCGC 27532
|||| | ||||| || ||| | ||||||| ||| ||| ||| || ||||||||
Sbjct 26798 AGCGAGAGCGGTCCACAGTGGGCCATCCTGAAAACGGGCCTGTTTGATGACGTGTACCGT 26857
Query 27533 GCTATCGACTTCATTTACGAAGGCAATCAGATAACGTGCGGCGATAAGCTGGAATCCGTG 27592
| || || ||| | ||||||||| || || ||||| || ||||||||||| |||
Sbjct 26858 GGGATTGATTTCTTCTACGAAGGCGGCGCTATCACATGCGGTGACAAGCTGGAATCTGTG 26917
Query 27593 ACCGGGAAATTGCAGTTCGATATCAGCAG-CCAGTACGACAAGCAACAGGAACACCTGCT 27651
||||| | | | || | ||| | | ||| || ||||| |||||||| ||| ||||
Sbjct 26918 ACCGGACAGCTTAATTTTG-CATCGTCTGCCCAATATGACAAACAACAGGAGCACTTGCT 26976
Query 27652 GTTTACTCCGTTGTTCAAAGCGGATAACGCCAGAGTTTTCGACCTTGAAGTTGAATCGTC 27711
| | | ||| | |||| ||||| ||||| ||| | |||||||| || ||||| ||
Sbjct 26977 CTATTCCCCGCTCATCAAGGCGGACAACGCGAGACTGTTCGACCTCGAGCTTGAAGTATC 27036
Query 27712 AACTGGCGTTGCGCAGTACGCTGACCGCCTTTTTCTCTCTGCAACCACTGACGGCATCAA 27771
|| |||||||| || | |||||| || || ||| ||||| | |||||||| ||||||||
Sbjct 27037 GACGGGCGTTGCTCAATTCGCTGAACGGCTGTTTATCTCTACCACCACTGATGGCATCAA 27096
Query 27772 TTACGGACGTGAGCAGATGATTGAGCAGAATGAACCGTTCGTTTACGACAAACGCGTTTT 27831
||||| | || || ||| | | ||||| ||||||| || ||| | | | |
Sbjct 27097 CTACGGCAGGGAACAAATGGTGCCGTGGAATGCACCGTTCCGCTATGACCAGAGGGCGCT 27156
Query 27832 GTGGAAGCGAGTCGGGCGCATCAGGAAAAATGTTGGCTTCAAATTGCGCGTTATCACGAA 27891
||| || | ||||| | | ||||| | |||||||| || | |||| || ||
Sbjct 27157 ATGGCGTCGGATTGGGCGTGTGCGCAAAAACATCGGCTTCAAGTTCAGAATTATTACTAA 27216
Query 27892 GTCACCTGTAACTCTGTC-TGGCTGCCAGATAAGGATTGAGTAATGGCTGAT 27942
|| ||||| || || |||| | || | ||| |||||| |||||||||
Sbjct 27217 AAGCCCGGTAACCCTATCAGGGCTACAAG-TGAGGGTTGAGTGATGGCTGAT 27267
Score = 176 bits (194), Expect = 1e-39
Identities = 387/577 (67%), Gaps = 10/577 (2%)
Strand=Plus/Minus
Query 29492 TGGCTATCTGGTCAGATGAACAACTACCAGAATCTGGCAAATATCGGTCTTGGCGCTCTT 29551
|||||| | || |||||||| || | ||| ||||||| ||||| | || || |
Sbjct 29184 TGGCTAGCCGGCCAGATGAATAATGCGAACAATTTGGCAAACATCGGATTGGGAGCATTG 29125
Query 29552 CAGGGGCAGGCAAACGCCGGGCAAACATATGCCAACAACATGAGTCAGATTTCGCAGCAA 29611
|| ||||| || ||||| || ||||| || ||||||||| | ||| | | ||||||
Sbjct 29124 CAAGGGCAAGCCAACGCAGGTCAAACCTACACCAACAACACTGGGCAGTTATTGCAGCAG 29065
Query 29612 AGTGCGGCTCTTGCAGCGGCAAATGCCAACAGACCATCAGCAATGCAATCTGCTATT--- 29668
| ||||| || || ||||| || || || || ||||| || | || | |||
Sbjct 29064 AACGCGGCGCTCGCCGCGGCCAACGCTAATAGGCCATCGGCGCTACAGCAGGGAATTTCT 29005
Query 29669 GGCGGAGGTGCGTCTGGTGCTATTGCTGGGGCTGGACTTGCGAAATTAATCGGTTCAT-- 29726
|||||| || ||||||| ||||||| | || ||| | | || | |||
Sbjct 29004 GGCGGATTTGG---TGGTGCTCTTGCTGGCGGCGGCATTGTTAG--TGCTCTGGGCATGT 28950
Query 29727 CAACTCCGTGGGGGGCTGCGATCGGCGGCGGTCTTGGTCTGCTTGGCTCGTTGTTTTAAG 29786
| || ||||||||||||| ||||| | || | || | | |||||| | |||||||
Sbjct 28949 CTACGCCGTGGGGGGCTGGTATCGGTGCAGGCATCGGAATTTTAGGCTCGCTATTTTAAG 28890
Query 29787 GGGTAATCATGGCTACGTGGCAACAGGGTATTAATTCTGGTGGTTTTCTGGCTGGCATCG 29846
| || | ||||||||| ||||| ||| |||||| ||||| || |||| | |||| | |
Sbjct 28889 GTGTGAACATGGCTACTTGGCAGCAGAATATTAACTCTGGCGGCTTTCCTGGTGGCGTTG 28830
Query 29847 GTACGCAAAATGAGAATGCGCCAAAGGCAAGCGACATTAACGCAACGCTTGGTCTGATCC 29906
|| | ||| ||||| ||| | || || || |||||||||||| || ||||| |
Sbjct 28829 GTCAGGTAAACACCAATGCACCACAAGCCAGTGATGTTAACGCAACGCCAGGACTGATTC 28770
Query 29907 GCGAAAACAATGAACTGGCTCGCTCAGGTGTAAATAACGTTGGCCTGACCGCGTTACGTG 29966
| | ||||| || | || ||| | || | || || | ||| || || |||| |
Sbjct 28769 GACAGAACAACGACTTTGCCCGCGCTGGCGGTAACAATATCGGCTTGCAGGCATTACAGG 28710
Query 29967 GTCTGGCTGGAGTTGCTGATATTTACAATCAGGAACAGCAACAGAAAGCTATTAGTGCGT 30026
| ||| || | ||||| |||||| || || |||| ||||||| | ||| |
Sbjct 28709 GGCTGCAAGGGCTGTCTGATGCTTACAAGCAAGACCAGCTACAGAAAACGCAAGCTGCAT 28650
Query 30027 TCAATAAGGTTCACGCTGATGCATGGGCTTCTGGTGA 30063
||||| ||| | || | |||||| ||||||||
Sbjct 28649 TCAATCAGGCCTATGCCAACGCATGGAAATCTGGTGA 28613
>seq8456
Length=1453
Score = 179 bits (198), Expect = 9e-41
Identities = 309/442 (70%), Gaps = 5/442 (1%)
Strand=Plus/Plus
Query 27503 AAAACTGGCTTGTATGACGATGTGTACCGCGCTATCGACTTCATTTACGAAGGCAATCAG 27562
||||| ||| ||| ||| || |||||||| | || || ||| | |||||||||
Sbjct 1 AAAACGGGCCTGTTTGATGACGTGTACCGTGGGATTGATTTCTTCTACGAAGGCGGCGCT 60
Query 27563 ATAACGTGCGGCGATAAGCTGGAATCCGTGACCGGGAAATTGCAGTTCGATATCAGCAG- 27621
|| || |||| || ||||||||||| |||||||||| | | || | ||| | |
Sbjct 61 ATCACATGCGT-GACAAGCTGGAATCTGTGACCGGGACAGCTTAATTTG-CATCGTCTGC 118
Query 27622 CCAGTACGACAAGCAACAGGAACACCTGCTGTTTACTCCGTTGTTCAAAGCGGATAACGC 27681
||| || ||||| |||||||| ||| |||| | | | ||| | |||| ||||| |||||
Sbjct 119 CCAATATGACAAACAACAGGAGCACTTGCTCTATTCCCCGCTCATCAAGGCGGACAACGC 178
Query 27682 CAGAGTTTTCGACCTTGAAGTTGAATCGTCAACTGGCGTTGCGCAGTACGCTGACCGCCT 27741
||| | |||||||| || ||||| || || |||||||| || | |||||| || ||
Sbjct 179 GAGACTGTTCGACCTCGAGCTTGAAGTATCGACGGGCGTTGCTCAATTCGCTGAACGGCT 238
Query 27742 TTTTCTCTCTGCAACCACTGACGGCATCAATTACGGACGTGAGCAGATGATTGAGCAGAA 27801
||| ||||| | |||||||| |||||||| ||||| | || || ||| | | |||
Sbjct 239 GTTTATCTCTACCACCACTGATGGCATCAACTACGGCAGGGAACAAATGGTGCCGTGGAA 298
Query 27802 TGAACCGTTCGTTTACGACAAACGCGTTTTGTGGAAGCGAGTCGGGCGCATCAGGAAAAA 27861
|| ||||||| || ||| | | | | ||| || | ||||| | | |||||
Sbjct 299 TGCACCGTTCCGCTATGACCAGAGGGCGCTATGGCGTCGGATTGGGCGTGTGCGCAAAAA 358
Query 27862 TGTTGGCTTCAAATTGCGCGTTATCACGAAGTCACCTGTAACTCTGTC-TGGCTGCCAGA 27920
| |||||||| || | |||| || || || ||||| || || |||| | ||
Sbjct 359 CATCGGCTTCAAGTTCAGAATTATTACTAAAAGCCCGGTAACCCTATCAGGGCTACAAG- 417
Query 27921 TAAGGATTGAGTAATGGCTGAT 27942
| ||| |||||| |||||||||
Sbjct 418 TGAGGGTTGAGTGATGGCTGAT 439
>seq4809
Length=3389
Score = 84.2 bits (92), Expect = 5e-12
Identities = 103/141 (73%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 14078 AAAGAAGCGCGCGGCAGAGAATGCCAGGTACGTATTTACGGCGTATGCAATGGTAATCCT 14137
||||| || | ||| |||| || ||||| | | | || | || || ||||| ||
Sbjct 597 AAAGAGGCCAGAGGCCGAGAGTGTCAGGTGAGGCTCTCGGGTATCTGTAACGGTAACACT 656
Query 14138 GAAACTACAGTTCTGGCACATTACCGGATGGCTGGAATTTGCGGAACTGGAATGAAGCCT 14197
||||| ||| ||||| ||||||| ||| | || |||||||| || || |||||||||
Sbjct 657 GAAACCGTAGTGCTGGCCTATTACCGAATGTCCGGCATTTGCGGCACAGGCATGAAGCCT 716
Query 14198 GACGACCTGATCGGTGCATGG 14218
|||||||| | || ||||||
Sbjct 717 GACGACCTTTTTGGCGCATGG 737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 122404757814846
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