Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq57 122 8e-23
seq126 96.9 3e-15
seq33 96.9 3e-15
>seq57
Length=2082711
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| || || || ||| |||| || ||||| || || | || |||||||| ||
Sbjct 1618839 ATGCAAATATTTGTGAAAACTTTGACTGGAAAAACCATTACTCTTGAAGTTGAACCATCT 1618780
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | |||| || ||| || ||| ||||||||||| | || || ||||||
Sbjct 1618779 GACACTATTGAAAATGTGAAAGCGAAAATTCAAGACAAGGAAGGAATACCACCTGACCAG 1618720
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || ||||| || ||||| |||||||| | || || ||||||||
Sbjct 1618719 CAAAGGTTGATTTTCGCAGGGAAACAATTGGAAGATGGTCGCACCTTGTCAGATTATAAT 1618660
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
||||| || ||||| ||| | ||||| ||||| ||| || | |||||
Sbjct 1618659 ATTCAGAAGGAATCAACTTTACATCTAGTACTGAGATTGCGTGGCGG 1618613
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| || |||||||| || ||||| || || | || ||||| || ||
Sbjct 1619295 ATGCAAATTTTCGTGAAAACTCTGACTGGAAAAACAATTACTCTTGAAGTTGAGCCCTCT 1619236
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | | |||| || ||| | ||| ||| |||||||| | || || || |||
Sbjct 1619235 GATACTATTGAAAATGTTAAAGCCAAAATCCAGGATAAGGAAGGAATCCCACCAGATCAG 1619176
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || || ||||| || ||||||||||| ||| | ||||| ||
Sbjct 1619175 CAGCGTCTTATTTTTGCTGGAAAGCAGTTGGAAGATGGCCGAACTCTATCTGATTACAAT 1619116
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||| || || || |||||| | || ||| | || || || ||||
Sbjct 1619115 ATTCAAAAGGAGTCCACCCTTCATTTAGTTCTTCGTCTTAGAGGTGGTA 1619067
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||||||||| ||||| || ||||| || ||||| || || | || ||||| |||||
Sbjct 1620891 ATGCAAATTTTTGTAAAAACCCTGACTGGAAAAACTATTACTCTTGAAGTTGAGCCGTCA 1620832
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | || | || || | ||| ||| || ||||| | || ||||||||
Sbjct 1620831 GATACAATAGAGAACGTAAAGGCTAAAATCCAGGATAAAGAAGGAATTCCACCCGACCAA 1620772
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | |||| ||||| || || ||||| ||||| ||| | ||||||||
Sbjct 1620771 CAAAGATTAATCTTCGCCGGAAAGCAGTTAGAAGATGGCCGCACTCTTTCAGATTATAAT 1620712
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
||||| |||||||| ||||| ||||| ||||| |||||||| || ||
Sbjct 1620711 ATTCAGAAAGAATCTACTCTACATCTTGTACTCAGACTGAGAGGAGG 1620665
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| || ||| | ||||| |||||||| ||| | || || ||||| ||
Sbjct 1619067 ATGCAGATATTCGTGAAAACTTTAACAGGAAAAACGATTACCTTAGAAGTAGAACCTTCT 1619008
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | |||| || ||| | || || |||||||| | || ||||| |||
Sbjct 1619007 GATACAATTGAAAATGTAAAAGCTAAGATTCAAGATAAGGAAGGAATCCCTCCCGATCAG 1618948
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || |||||||| |||||||||||||| | ||| | |||||||||
Sbjct 1618947 CAAAGGTTGATTTTCGCTGGGAAACAGTTGGAAGATGGTCGAACTCTTTCTGATTATAAC 1618888
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| ||||| || || | ||||| || |||||||| | || ||||
Sbjct 1618887 ATTCAGAAAGAGTCAACATTGCATCTTGTCCTTAGACTTCGAGGAGGTA 1618839
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||||||||| || || |||||||| || ||||| || || | || || || || ||
Sbjct 1620663 ATGCAAATTTTTGTGAAAACTCTGACTGGAAAAACAATTACTCTTGAAGTGGAGCCCTCT 1620604
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | | |||| || ||| | ||| ||| |||||||| | || || || |||
Sbjct 1620603 GATACTATTGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGGAATCCCACCAGATCAG 1620544
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || || ||||| || ||||||||||| ||| | ||||| ||
Sbjct 1620543 CAGCGTCTTATTTTTGCTGGAAAGCAGTTGGAAGATGGCCGAACTCTATCTGATTACAAT 1620484
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||| || || || |||||| | || ||| | || || || ||||
Sbjct 1620483 ATTCAAAAGGAGTCCACCCTTCATTTAGTTCTTCGTCTTAGAGGTGGTA 1620435
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| |||||||| ||||| || || || || | || || ||||| ||
Sbjct 1620207 ATGCAGATCTTCGTTAAGACTCTTACAGGAAAGACTATTACTCTTGAAGTAGAACCTTCT 1620148
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | |||| || ||| || || || |||||||| | || || ||||||
Sbjct 1620147 GACACAATTGAAAATGTAAAAGCGAAGATTCAAGATAAGGAAGGAATACCACCTGACCAG 1620088
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || |||||||| |||||||| ||||| || | ||||| ||
Sbjct 1620087 CAAAGGTTGATTTTCGCTGGGAAACAGTTAGAAGATGGGCGCACCCTTTCTGATTACAAT 1620028
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
||||| |||||||| ||||||||||| || | |||||||| || ||
Sbjct 1620027 ATTCAGAAAGAATCAACTCTTCATCTTGTCTTAAGACTGAGAGGAGG 1619981
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||||||||| || || |||||||| || ||||| || || | || ||||| |||||
Sbjct 1619751 ATGCAAATTTTTGTGAAAACTCTGACTGGAAAAACTATTACTCTTGAAGTTGAGCCGTCT 1619692
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | || | || || | ||| ||| || ||||| | || || || |||
Sbjct 1619691 GATACAATAGAGAACGTAAAGGCTAAAATCCAGGATAAAGAAGGAATTCCACCAGATCAG 1619632
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || || ||||| || ||||| ||||| ||| | ||||| ||
Sbjct 1619631 CAGCGTCTTATTTTTGCTGGAAAGCAGTTAGAAGATGGCCGAACTCTATCTGATTACAAT 1619572
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||| || || || |||||| |||| ||| | || || || ||||
Sbjct 1619571 ATTCAAAAGGAGTCCACCCTTCATTTGGTTCTTCGGCTCAGAGGGGGTA 1619523
>seq126
Length=1333976
Score = 96.9 bits (106), Expect = 3e-15
Identities = 153/217 (71%), Gaps = 7/217 (3%)
Strand=Plus/Plus
Query 22460 ACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAA 22519
|||||||| || || || ||||| | | | ||| || || | || |||||||| ||
Sbjct 1331856 ACTTGAAATTCTCCAGATAAGACCCTTCTTGTGTACATATTTGTAGTAAACGGTTCAAAT 1331915
Query 22520 GATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGC 22579
||||||||||| || |||||||| || || ||||| || ||||| || || | || |
Sbjct 1331916 GATTCATTGTTGCCAAGTATCTGCGCTGTAGAAGCTGTAGGCATTGGTGCTAGTAGCAAG 1331975
Query 22580 GAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTT--GAGCATCGACCAGTCCCACAGAT 22637
|| ||||||| || || | | |||||| | ||| |||| | ||||||||| ||
Sbjct 1331976 GAATTTCTCAGACCATGTTCGGCAATTTTTCGCTTCAAAGCA--GTCCAGTCCCAGAGTG 1332033
Query 22638 CGGACGGCGTCACATTGTCCCACATATCGTATTGCAA 22674
|| || || ||||| |||||| || || || ||
Sbjct 1332034 TGGTTGGTGTTACATT---CCACATGTCATACTGTAA 1332067
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/199 (70%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 23722 AGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTA 23781
||||| || | ||||| ||||| || ||||| || || || ||||| |||||
Sbjct 1318416 AGACAACTGTGGCTTGGGTGTAGCTGCATTGAACATCGTAGGTGATGCATGCGTGAAGTA 1318357
Query 23782 TCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACC 23841
|| | |||||| |||||||| || || ||||| || ||||| || || ||||| |||||
Sbjct 1318356 ACCTTCCGACATCAGATTGTAAGTCTCTATGGCTGCGTCAATATCATCGCCGTGAATACC 1318297
Query 23842 GATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGAC--CGTGACGCCGTTAATTTTG 23899
| || || | ||||| ||| | ||||| | || || | | | | | |||||
Sbjct 1318296 CACAGCAACCCTCATCAACATATGCTGAGGGCGTTCCACTACTTTAT--CATGGATTTTT 1318239
Query 23900 AACAGATATGAACGTTGCA 23918
|| | ||||||||||| ||
Sbjct 1318238 AATAAATATGAACGTTCCA 1318220
>seq33
Length=2490231
Score = 96.9 bits (106), Expect = 3e-15
Identities = 98/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 57509 TGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCAGA 57568
|||||| || | | || || ||| |||||||| || ||||| |||||||| | ||
Sbjct 181168 TGAACCTCTACTTCGTGAAAACCCCAAAAGATTTGTGATATTTCCAATTGAATACCATGA 181227
Query 57569 CATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCT 57628
|| ||| | ||||||||||| |||||||| || |||||||| || |||||||| || ||
Sbjct 181228 TATATGGCAAATGTACAAAAAAGCAGAAGCGTCTTTTTGGACGGTTGAAGAAGTTGATCT 181287
Query 57629 GTCTAAGG 57636
|| ||||
Sbjct 181288 TTCAAAGG 181295
Score = 86.0 bits (94), Expect = 6e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 57954 ACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCG 58013
|| ||||| || || || || | || || || || || || ||||| |||| || ||
Sbjct 182503 ACTGCCACTTTTGCAGAAAGAATTATTGCTTTTGCTGCTGTGGAAGGCGTATTTTTCTCT 182562
Query 58014 GGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTT 58073
|| ||||||||||| ||||||||| | |||||| | || | ||||| || || || ||
Sbjct 182563 GGTAGCTTTGCGGCTATATTTTGGTTAAAGAAAAGAGGATTAATGCCAGGGCTTACTTTC 182622
Query 58074 AGCAACGAGTTGATATC 58090
||||| || ||||| ||
Sbjct 182623 AGCAATGAATTGATTTC 182639
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445674254513040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |