Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_003278.1 Length=35580 Score E Sequences producing significant alignments: (Bits) Value seq13965 91.5 3e-14 >seq13965 Length=1093 Score = 91.5 bits (100), Expect = 3e-14 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 12801 GATCAGCAGGCGGAAATCGCCGCCCGCCTCGCCCTGGAGTCCGAACCGCTGACCAAGCTG 12860 || |||||||| | |||||| ||| | ||||||||||| ||||| ||| || Sbjct 405 GACCAGCAGGCATCGGTTGCCGCCGCCCTGTCGCTGGAGTCCGAGCCGCT---CAACGTG 461 Query 12861 CTCG---AGGAAAACGCATACCGCGAAATGCTCTGGCGCCAGCGGGTCAACGAGGCGGCT 12917 ||| ||| | || ||||||||| |||| | ||||| ||| ||||||||| ||| Sbjct 462 ATCGCCCAGGCGATGGCCTACCGCGAATTGCTGTTGCGCCGGCGAATCAACGAGGGGGCC 521 Query 12918 CTCGCCAACATGCTG-GCCAGCGCCCAGGGCGCTGACCTCGACCAGCTCGCCGCGAACTA 12976 |||| ||||||| |||| |||| | ||| | ||||| ||| | || ||||| ||| Sbjct 522 GCCGCCTGCATGCTGAGCCA-CGCCGAAGGCACCGACCTGGACAACCTGGCCGCCAACCT 580 Query 12977 CAACGTCAAGCGCCTG 12992 | || | |||||||| Sbjct 581 CGACACCGAGCGCCTG 596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113712065193948