Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_003278.1
Length=35580
Score E
Sequences producing significant alignments: (Bits) Value
seq13965 91.5 3e-14
>seq13965
Length=1093
Score = 91.5 bits (100), Expect = 3e-14
Identities = 140/196 (71%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 12801 GATCAGCAGGCGGAAATCGCCGCCCGCCTCGCCCTGGAGTCCGAACCGCTGACCAAGCTG 12860
|| |||||||| | |||||| ||| | ||||||||||| ||||| ||| ||
Sbjct 405 GACCAGCAGGCATCGGTTGCCGCCGCCCTGTCGCTGGAGTCCGAGCCGCT---CAACGTG 461
Query 12861 CTCG---AGGAAAACGCATACCGCGAAATGCTCTGGCGCCAGCGGGTCAACGAGGCGGCT 12917
||| ||| | || ||||||||| |||| | ||||| ||| ||||||||| |||
Sbjct 462 ATCGCCCAGGCGATGGCCTACCGCGAATTGCTGTTGCGCCGGCGAATCAACGAGGGGGCC 521
Query 12918 CTCGCCAACATGCTG-GCCAGCGCCCAGGGCGCTGACCTCGACCAGCTCGCCGCGAACTA 12976
|||| ||||||| |||| |||| | ||| | ||||| ||| | || ||||| |||
Sbjct 522 GCCGCCTGCATGCTGAGCCA-CGCCGAAGGCACCGACCTGGACAACCTGGCCGCCAACCT 580
Query 12977 CAACGTCAAGCGCCTG 12992
| || | ||||||||
Sbjct 581 CGACACCGAGCGCCTG 596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 113712065193948
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |