Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_003309.1
Length=53373
Score E
Sequences producing significant alignments: (Bits) Value
seq1601 228 3e-55
>seq1601
Length=30922
Score = 228 bits (252), Expect = 3e-55
Identities = 384/547 (70%), Gaps = 9/547 (2%)
Strand=Plus/Plus
Query 22936 CCCTGGATCGGCGGCAAGCGTCGACTCGCTGACCACATCATCCCGCGCTTTCCGAAGCAC 22995
|||||||| ||||| || || ||||| || | || || | |||||||| ||| |||
Sbjct 8271 CCCTGGATAGGCGGTAAACGGCGACTGGCAAAACAGATTTTACCGCGCTTCCCGGCGCAT 8330
Query 22996 GACTGTTACGTCGAGGTGTTCGCGGGCGGGGCGGCGCTGTACTTCATGC-GACCGCCAGC 23054
||| ||||| ||| || |||| ||||||||| | ||| ||| | ||||
Sbjct 8331 ACCTGCTACGTGGAGCCATTTTGTGGCGCGGCGGCGCTCTTCTTTATGAAGTTACCCAGT 8390
Query 23055 CAGGGTCGAGGTGATCAACGATATCAACGGCGAGCTGGTGAACCTGTATCGCGTCGTTCA 23114
||| |||||||| ||||||||||||||||||||||| || || ||||| || | |
Sbjct 8391 AAGGCG-GAGGTGATTAACGATATCAACGGCGAGCTGGTCAATCTCTATCGGGTGCTGAA 8449
Query 23115 GCACCATCTCGAAGAGTTCGTGCGTCAGTTCAAATGGGCGCTGACGAGCCGGCAGGTGTT 23174
|||||||| |||||||| |||| ||||| |||||||||||| |||||| | |||
Sbjct 8450 ACACCATCTGGAAGAGTTTATGCGCCAGTTTAAATGGGCGCTGGTCAGCCGGGCGATGTA 8509
Query 23175 CGAGTGGCTGAAGCATACGGTCCCGGAAACCCTCACCGACATCCAG-CGTGCGGCACGCT 23233
| ||| | || |||| | || ||| | ||||| | || || ||||| | |
Sbjct 8510 TCAATGGTTAAACATTACGCCGACCGAGACCTTAACCGATAGGAAGCCGCGCGGCCTGTT 8569
Query 23234 TCTACTACCTGCAAAAA-AGTTGCTTTGGCGGGAAGCTTGAAGGGCAGACGTTCGGAACG 23292
|||| |||||||||||| || | || ||||| || | | | || || ||||| |
Sbjct 8570 TCTATTACCTGCAAAAACAGGCG-TTCGGCGGTAAAGTCGCCGAACACACCTTCGGCATT 8628
Query 23293 GCGACGACTACGGTGCCGGGCCTGAACCTGCTGCGCATCGAAGAAGAGCTATCGGCGGCG 23352
|| || || | | ||| ||||||||||||| ||||| ||||| ||||| ||| ||
Sbjct 8629 GCCACCACCAGAGGGCCACGCCTGAACCTGCTACGCATGGAAGAGGAGCTGTCGCTCGCT 8688
Query 23353 CACATTCG--TCTCGCGAATGCGTACATCGAGCGGCTCGATTGGGCGACCTGCATCGATC 23410
|| | || | || || | | ||| || | |||||||| | |||||||| | |
Sbjct 8689 CATCTGCGATTGTCACGCA--CCACCATTGAACAAATCGATTGGTCAACCTGCATTGCCC 8746
Query 23411 GTTACGATCGGCCGCACACGCTGTTCTACCTTGATCCGCCGTACTTCGAGACTGAAGGGT 23470
|||| || || ||||||||||| || ||| ||| |||||||| | | ||||| || |
Sbjct 8747 GTTATGACCGTCCGCACACGCTCTTTTACTGTGACCCGCCGTATTGGGGTACTGAGGGCT 8806
Query 23471 ACGGCGT 23477
| |||||
Sbjct 8807 ATGGCGT 8813
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 170638483965990
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |