Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq33 122 1e-22 seq126 95.1 2e-14 >seq33 Length=2490231 Score = 122 bits (134), Expect = 1e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 36424 AACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTG 36483 || ||| ||||| || | | ||| ||||| || || |||| ||||| || || ||||| Sbjct 181688 AATATAAGTATCTATGAGTAAACTGTACATCTCAGAGTGAACATTTTCCATTGCAATTTG 181629 Query 36484 AAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAA 36543 || ||||| |||||||| || || || | || |||||| || ||| | || |||| Sbjct 181628 GAAACCGTAAAAACATCTTGCTTCAGTTACTTGAACTTCTTGACTAAACCTCTCAACTAA 181569 Query 36544 ATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATA 36603 |||||||| || ||||| ||| ||| ||||| || ||||||||||| ||||||| Sbjct 181568 GTTTTCATTAACAATTCCATCAGAGGCAGCAAAGAAAGCCAATACATGAGAAATAAAATG 181509 Query 36604 TTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATAT 36653 |||||| | ||| | | || |||||| || | ||| | | ||| || Sbjct 181508 TTTTTCTTCAGGTTTCAACCTAGTCCAATGATCTAAATCCTAAAATAAAT 181459 Score = 100 bits (110), Expect = 4e-16 Identities = 157/224 (70%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 36182 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 36241 || |||||| ||| ||||| ||| || || || || ||||||| || | || || Sbjct 182648 TCATCTCTAGAAATCAATTCATTGCTGAAAGTAAGCCCTGGCATTAATCCTCTTTTCTTT 182589 Query 36242 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCA 36301 | ||||||||| | |||||| ||||| || || | ||||| || || ||||| ||| Sbjct 182588 AACCAAAATATAGCCGCAAAGCTACCAGAGAAAAATACGCCTTCCACAGCAGCAAAAGCA 182529 Query 36302 ATAAGTCTCTCTCCATAACCGGCACTGTCATGT---ATCCACTTTTGAGCCCAATCGGCC 36358 |||| ||| ||| || || |||| | | | ||||| | |||||| || || Sbjct 182528 ATAATTCTTTCTGCAAAAGTGGCAGTCTTAGAGGAGATCCATTCCAAAGCCCAGTCAGCT 182469 Query 36359 TTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATA 36402 || || || |||||| || ||||| || |||||||||||||| Sbjct 182468 TTTTTCTTCACACAATCCAGAGTCTCAATTGCATTAAAGAGATA 182425 >seq126 Length=1333976 Score = 95.1 bits (104), Expect = 2e-14 Identities = 124/172 (72%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858 |||||||| ||||| || |||||||||| ||| || | || |||||||| || | | Sbjct 1317146 CACTAAATGTCTTTTTGGTCTCTTTGTGTAAATTAGAAATTGCAATTCTAGCTGCCAATA 1317087 Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918 | ||| |||||||||||| ||||| || || || | || || || | | | |||| Sbjct 1317086 TAGCAAAATCCGGATGTTTGGTAGTCATTGTAGCAGCAGTCTCCGCAGCTAAATTATCCA 1317027 Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTAT 66970 |||| || ||||| |||||| |||| ||| || || ||||||| ||| Sbjct 1317026 ATTCCACGGTTGTGACTCCAGGGTATAGTCCACTTATTACTTTCATAGTTAT 1316975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658036747455080