Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_003444.1
Length=37074
Score E
Sequences producing significant alignments: (Bits) Value
seq3708 120 7e-23
seq1653 102 2e-17
>seq3708
Length=7132
Score = 120 bits (132), Expect = 7e-23
Identities = 238/351 (68%), Gaps = 1/351 (0%)
Strand=Plus/Minus
Query 13562 GGGGAAAACATCCTTTCCTGCGATACGGAGAAGAGTATCCGGGAGCGTTTTTCTGTTTAC 13621
|| ||||| || || |||| |||||||| |||||||||| || || ||||| | ||
Sbjct 2404 GGAGAAAATATTCTCACCTGTGATACGGAACAGAGTATCCGCGAACGCTTTTCGGAATAT 2345
Query 13622 CAGGTGGCGGGGCAGCGTGCCGGAAACGACGATGATTTCGGTGAGGCCACCACCACCGCG 13681
||||||||||| || || | ||| | || | |||| |||||| ||||| || ||
Sbjct 2344 CAGGTGGCGGGTCAACGCTCGGGAGATGATGCTGATCACGGTGAAGCCACGCTAACGGCA 2285
Query 13682 CTGCGGGCCCGCACAGAGGACGCATTTATTGCCCGTTACCGTCCGATGTATATCAGGCAG 13741
||||| ||| | | | ||| ||| | || || || ||| ||||| |||
Sbjct 2284 CTGCGAGCCAGAGCCAAAGACAGCCAGATTACGCGCTATCGCCCGCAACATATCCACCAG 2225
Query 13742 ACAGGGCAGGCTACGGGGGCAGGCTGTATTGCGCGTGCTGACTTTGAAGCCCGACAACGG 13801
| || | | || || || ||||| || || ||| ||||||||| |||| |
Sbjct 2224 GCCGGTAATACAACCGGAGCCAGCTGTCGCGCTCGCAGTGAATTTGAAGCCAGACAGTGT 2165
Query 13802 GCGGCGCGGACGGATGAAACCACCTATGTGGTGCAGGGCTGGCGACAGGGTAACGGTACG 13861
|| || | || || ||||| |||||| || || || | ||| || ||| |||| |
Sbjct 2164 GCAGCCAGAACCGAGGAAACGACCTATACAGTACAAGGTTAGCGGCAAGGTGACGGCAGC 2105
Query 13862 CTGTGGCAGCCCAACCAGCGGGTGATTGTCTTTGATCCGGT-CTGTGGTTT 13911
|| ||| ||| || || || || ||||| ||||||||||| ||| | |||
Sbjct 2104 CTCTGGAAGCATAATCAACGCGTCATTGTGTTTGATCCGGTGCTGGGCTTT 2054
>seq1653
Length=29478
Score = 102 bits (112), Expect = 2e-17
Identities = 124/169 (73%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 20721 GTCTATTTGCCGTGCGTGTTCGGTAAGGTGATTAGGTGCAAGGTGAGCATATCGACGAAC 20780
||| |||| | || |||||||| | |||| |||| | ||||| || || | ||
Sbjct 556 GTCAATTTTTCTGGCATGTTCGGTTAAGTGAACCGGTGATAAATGAGCGTAACGTTGTAC 497
Query 20781 CATTTCGATAGACTCCCAGCCTCCCATTTCCTGTAACACTGACAACGGGACTCCGGCTTG 20840
||| |||||| ||||||||| |||||||| || || | |||| || || || | ||
Sbjct 496 CATCTCGATACTCTCCCAGCCCCCCATTTCTTGCAATGCAGACAGGGGCACGCCTGACTG 437
Query 20841 ACCCAGCCAACTTGCCCAGGTGTGTCTCAAGTCGTGAAATCTGAAATCA 20889
| | | ||||||||||||||| |||| || || ||||||||||| |||
Sbjct 436 AACTAACCAACTTGCCCAGGTATGTCGCAGATCATGAAATCTGAAGTCA 388
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 118491926355384
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |