Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_004313.1
Length=40149
Score E
Sequences producing significant alignments: (Bits) Value
seq7786 188 2e-43
>seq7786
Length=1398
Score = 188 bits (208), Expect = 2e-43
Identities = 241/332 (73%), Gaps = 0/332 (0%)
Strand=Plus/Minus
Query 38686 GATGAAGTACCCAACAGTTATTGTCAATGGTGTGTCCGTTCGTGTTGATGAGGACGGACG 38745
|||| | || ||||| || || || ||||| ||||| ||||||||||||| || || ||
Sbjct 1259 GATGCAATATCCAACGGTAATAGTAAATGGCGTGTCTGTTCGTGTTGATGGCGAAGGGCG 1200
Query 38746 CTACAACTTAAACGATCTTCATGCAGCAGCAGTTGCAAATGGCGAGGCAACTGAATCTCA 38805
||||||| | |||||||||||||| || || ||| || || ||||| | ||| |||||
Sbjct 1199 CTACAACCTGAACGATCTTCATGCCGCCGCCGTTCTTAACGGTGAGGCTAATGAGTCTCA 1140
Query 38806 ACGCCCCAGTAATTTTCTGAGGAGTGCACAGATTAAACGGTTCATTTCAGCACTAAAAGC 38865
||||| || ||| | | ||||| ||| | ||| ||||||| || || || ||
Sbjct 1139 GCGCCCGAGCCTTTTCATTCGTAGTGCTCAGGTAAAAAGGTTCATAAAGGCGCTTAAGGC 1080
Query 38866 CAAAGCTCAAAAAAGAGCTTTGAAAGAAATTCAACCACTTAAAGTAATAAAGGGTGGGGT 38925
|||||| ||||||||||||||| || ||| |||||| ||| | | || |||
Sbjct 1079 CAAAGCGCAAAAAAGAGCTTTGGAACAAAATCAACCTCTTGGCATCGTGCGCGGCGGGAA 1020
Query 38926 TGATTCTGGTGTGTGGGGTGTTGAACTACTGGCAATCAGATATGCAGCATGGATTAAGCC 38985
| | || | |||||||| || | ||||| || | ||||| ||||||||||||||
Sbjct 1019 TAGCCCAGGCATCTGGGGTGTCGAGTTGCTGGCTATACGCTATGCGGCATGGATTAAGCC 960
Query 38986 GGAATTTGAAATCGAAGTTTATGAAGTTTTCA 39017
||| || || ||| | ||||| | | |||||
Sbjct 959 GGAGTTCGAGATCAATGTTTACGCAACTTTCA 928
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 128329994006934
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |