Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_004688.1 Length=110865 Score E Sequences producing significant alignments: (Bits) Value seq3339 105 5e-18 >seq3339 Length=8650 Score = 105 bits (116), Expect = 5e-18 Identities = 128/174 (74%), Gaps = 9/174 (5%) Strand=Plus/Minus Query 99393 CTTGATGAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAAT 99452 |||||| ||||| || | ||||||||||| |||||||| |||||||| || | || || Sbjct 6622 CTTGATAAGGCCAGTGATAACATCCACGGAAGGCCGCTGAGTCGCCAGCACCAAGTGGAT 6563 Query 99453 GCCGGCCGCACGCGCCTTCTGCGCGATGCGGACAATGTTGGCCTCAACCTCTTTCTTGTA 99512 |||||||| ||||| |||||||| | ||| | || | || |||| ||| Sbjct 6562 ACCGGCCGCGCGCGCTTTCTGCGCTAGGCGAGCGATCAGCTCTTCCACCTTTTT------ 6509 Query 99513 GCCA---CCCATCATGAGATCAGCGAGTTCATCCACCACTACCACGATGTAGGG 99563 |||| ||||||| ||||| || | ||||||||||| |||||||| |||| Sbjct 6508 GCCAACCGCCATCATCAGATCGGCAAATTCATCCACCATCACCACGATAAAGGG 6455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354571723547082