Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq57 105 6e-18 >seq57 Length=2082711 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904 || ||||||||||||||||||||||| | | ||| | | || |||| ||| || || Sbjct 1620467 GTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTCCAACTGCTTTCCA 1620526 Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964 ||| ||||||| | ||||||||| || | || || || || ||||| |||| Sbjct 1620527 GCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTGGATTTTGGCTTTT 1620586 Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTT 19024 || | | | |||||| |||||| ||| | ||||| ||||| || || | |||| Sbjct 1620587 ACATTTTCAATAGTATCAGAGGGCTCCACTTCAAGAGTAATTGTTTTTCCAGTCAGAGTT 1620646 Query 19025 TTGACAAAAATTTGCATT 19042 || ||||||||||||||| Sbjct 1620647 TTCACAAAAATTTGCATT 1620664 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904 || ||||||||||||||||||||||| | | ||| | | || |||| ||| || || Sbjct 1619099 GTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTCCAACTGCTTTCCA 1619158 Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964 ||| ||||||| | ||||||||| || | || || || || ||||| ||| Sbjct 1619159 GCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTGGATTTTGGCTTTA 1619218 Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTT 19024 || | | | |||||| ||||| ||| | ||||| ||||| || || | |||| Sbjct 1619219 ACATTTTCAATAGTATCAGAGGGCTCAACTTCAAGAGTAATTGTTTTTCCAGTCAGAGTT 1619278 Query 19025 TTGACAAAAATTTGCATT 19042 || || |||||||||||| Sbjct 1619279 TTCACGAAAATTTGCATT 1619296 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904 || ||||||||||||||||||||||| | | ||| | | || || | ||| || || Sbjct 1619555 GTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTCTAACTGCTTTCCA 1619614 Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964 ||| ||||||| | ||||||||| || | || ||||| || ||||| ||| Sbjct 1619615 GCAAAAATAAGACGCTGCTGATCTGGTGGAATTCCTTCTTTATCCTGGATTTTAGCCTTT 1619674 Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTT 19024 || | | | ||||| ||||| ||| | ||||| ||||| || || | |||| Sbjct 1619675 ACGTTCTCTATTGTATCAGACGGCTCAACTTCAAGAGTAATAGTTTTTCCAGTCAGAGTT 1619734 Query 19025 TTGACAAAAATTTGCATT 19042 || ||||||||||||||| Sbjct 1619735 TTCACAAAAATTTGCATT 1619752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414489245054578