Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_004827.1 Length=43033 Score E Sequences producing significant alignments: (Bits) Value seq1577 102 2e-17 >seq1577 Length=31499 Score = 102 bits (112), Expect = 2e-17 Identities = 89/111 (80%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 5914 CTTCGCGGTCTAAAATATCCAGCACCCAGCGGCGGAAGTCTTTGGCTACTTTGGTGTGGC 5973 |||||||||| | ||||||||||||||| ||| || |||||||||||| ||| || Sbjct 20109 CTTCGCGGTCGAGAATATCCAGCACCCATTTGCGAAACTCTTTGGCTACTGGGGTACGGG 20168 Query 5974 TTAACATGCCGATGAGGTGTGCGCCGCGCAAGGAGAAGATGCGCACTTTTT 6024 |||||| ||| ||| |||||||| |||| |||||| ||||| ||| ||| Sbjct 20169 CAAACATGGCGACGAGATGTGCGCCACGCAGGGAGAAAATGCGGACTGTTT 20219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137556981684030