Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq57 113 3e-20
seq504 82.4 5e-11
>seq57
Length=2082711
Score = 113 bits (124), Expect = 3e-20
Identities = 167/235 (71%), Gaps = 14/235 (6%)
Strand=Plus/Plus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| ||||| | || | || ||||| | || ||||| ||||| |||||||||||||
Sbjct 1619068 ACCACCTCTAAGACGAAGAACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAG- 1619126
Query 33202 CAAATTGAGTTGG----TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCG 33257
|| ||||| | || ||||| ||||||||| ||| || | ||| ||||| || |
Sbjct 1619127 ---ATAGAGTTCGGCCATCTTCCAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTG 1619183
Query 33258 TGGGTATGCCTTCTTTTTC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGG 33314
|| || ||||| || || | | | || ||| || ||| ||| || || ||
Sbjct 1619184 GTGGGATTCCTTCCTTATCCTGGATTTTGGC---TTTAACATTTTCAATAGTATCAGAGG 1619240
Query 33315 GTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
| | ||| || ||||| || |||||||| || |||||||| ||||||||||||||
Sbjct 1619241 GCTCAACTTCAAGAGTAATTGTTTTTCCAGTCAGAGTTTTCACGAAAATTTGCAT 1619295
Score = 111 bits (122), Expect = 1e-19
Identities = 165/233 (71%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202
|| ||||| | || | ||||||||||| || ||||| || |||||||||||||| ||
Sbjct 1621121 CCACCTCTGAGTCGAAGAACCAAATGCAACGTGGACTCCTTCTGTATATTGTAATCGGAT 1621180
Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262
| | | || ||||| ||||||||| ||| ||||| |||||||| || | ||
Sbjct 1621181 AGGGTACGACCATCTTCCAACTGCTTTCCAGCAAAAATTAATCGTTGCTGATCAGGAGGG 1621240
Query 33263 ATGCCTTCTTTTTCGCTAA---TCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGA 33319
|| ||||| || || || | ||| ||||| ||| ||| || || || | |
Sbjct 1621241 ATTCCTTCCTTATCTTGAATTTTAGCC---TTTACGTTTTCAATAGTATCTGAAGGCTCA 1621297
Query 33320 ACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372
|| || |||||||| || || ||||| | ||||||||||| || ||||| ||
Sbjct 1621298 ACTTCAAGAGTTATTGTCTTCCCCGTCAACGTTTTTACGAAGATCTGCATTTT 1621350
Score = 107 bits (118), Expect = 1e-18
Identities = 166/235 (71%), Gaps = 14/235 (6%)
Strand=Plus/Plus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| ||||| | ||| | |||||||| | || ||||| ||||| |||||||||||||
Sbjct 1619524 ACCCCCTCTGAGCCGAAGAACCAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAG- 1619582
Query 33202 CAAATTGAGTTGG----TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCG 33257
|| ||||| | || || || ||||||||| ||| || | ||| ||||| || |
Sbjct 1619583 ---ATAGAGTTCGGCCATCTTCTAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTG 1619639
Query 33258 TGGGTATGCCTTCTTTTTC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGG 33314
|| || |||||||| || | | | ||| ||||| | | || || || |
Sbjct 1619640 GTGGAATTCCTTCTTTATCCTGGATTTTAGCC---TTTACGTTCTCTATTGTATCAGACG 1619696
Query 33315 GTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
| | ||| || ||||| || |||||||| || |||||||| || |||||||||||
Sbjct 1619697 GCTCAACTTCAAGAGTAATAGTTTTTCCAGTCAGAGTTTTCACAAAAATTTGCAT 1619751
Score = 107 bits (118), Expect = 1e-18
Identities = 166/235 (71%), Gaps = 14/235 (6%)
Strand=Plus/Plus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| ||||| | || | || ||||| | || ||||| ||||| |||||||||||||
Sbjct 1620436 ACCACCTCTAAGACGAAGAACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAG- 1620494
Query 33202 CAAATTGAGTTGG----TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCG 33257
|| ||||| | || ||||| ||||||||| ||| || | ||| ||||| || |
Sbjct 1620495 ---ATAGAGTTCGGCCATCTTCCAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTG 1620551
Query 33258 TGGGTATGCCTTCTTTTTC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGG 33314
|| || ||||| || || | | | || |||||| ||| ||| || || ||
Sbjct 1620552 GTGGGATTCCTTCCTTATCCTGGATTTTGGC---TTTTACATTTTCAATAGTATCAGAGG 1620608
Query 33315 GTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
| | || || ||||| || |||||||| || |||||||| || |||||||||||
Sbjct 1620609 GCTCCACTTCAAGAGTAATTGTTTTTCCAGTCAGAGTTTTCACAAAAATTTGCAT 1620663
Score = 95.1 bits (104), Expect = 8e-15
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCA 33232
|| || ||||| || |||||||||||||| | || | || || || || || |||
Sbjct 1620011 GTTGATTCTTTCTGAATATTGTAATCAGAAAGGGTGCGCCCATCTTCTAACTGTTTCCCA 1620070
Query 33233 CTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTT 33292
|| || || | ||||||||| | ||||| ||||| || || |||| | ||||
Sbjct 1620071 GCGAAAATCAACCTTTGCTGGTCAGGTGGTATTCCTTCCTTATCTTGAATCTTCGCTTTT 1620130
Query 33293 ACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTT 33352
|| ||| ||| ||||| |||| || || ||||| || || ||||| ||||||||
Sbjct 1620131 ACATTTTCAATTGTGTCAGAAGGTTCTACTTCAAGAGTAATAGTCTTTCCTGTAAGAGTC 1620190
Query 33353 TTTACGAAAATTTGCAT 33369
|| ||||| || |||||
Sbjct 1620191 TTAACGAAGATCTGCAT 1620207
Score = 89.7 bits (98), Expect = 3e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202
|| ||||| | || | ||||||||||| || |||||||| ||||||||||||||||||
Sbjct 1620209 CCACCTCTGAGACGAAGAACCAAATGCAACGTGGACTCTTTCTGTATATTGTAATCAGAC 1620268
Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262
| || | || ||||| ||||| || ||| || || | || || || | ||
Sbjct 1620269 AGTGTGCGACCATCTTCCAACTGCTTGCCTGCAAAGATCAACCTCTGTTGATCTGGTGGA 1620328
Query 33263 ATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACG 33322
|| |||||||| || ||| ||| || ||| ||| || || |||| ||
Sbjct 1620329 ATACCTTCTTTATCTTGAATTTTAGCTTTCACATTTTCAATTGTATCAGATGGTTCTACT 1620388
Query 33323 TCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| | || || |||||||| || | ||||| ||||| || |||||
Sbjct 1620389 TCTAAGGTGATGGTTTTTCCGGTTAACGTTTTGACGAATATCTGCAT 1620435
Score = 86.0 bits (94), Expect = 4e-12
Identities = 144/208 (69%), Gaps = 8/208 (4%)
Strand=Plus/Plus
Query 33166 ATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG----TCATCCA 33221
||||||||| |||||||| || || || |||||||| | ||||| | || ||||
Sbjct 1618864 ATGCAATGTTGACTCTTTCTGAATGTTATAATCAGAAA----GAGTTCGACCATCTTCCA 1618919
Query 33222 ATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAA 33281
| || || ||| || || || | |||||| || | || || ||||| || || ||
Sbjct 1618920 ACTGTTTCCCAGCGAAAATCAACCTTTGCTGATCGGGAGGGATTCCTTCCTTATCTTGAA 1618979
Query 33282 TCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTC 33341
|| |||||| ||| ||| || || |||| || || | || ||||||||||
Sbjct 1618980 TCTTAGCTTTTACATTTTCAATTGTATCAGAAGGTTCTACTTCTAAGGTAATCGTTTTTC 1619039
Query 33342 CCGTAAGAGTTTTTACGAAAATTTGCAT 33369
| || | |||||| ||||| || |||||
Sbjct 1619040 CTGTTAAAGTTTTCACGAATATCTGCAT 1619067
>seq504
Length=327254
Score = 82.4 bits (90), Expect = 5e-11
Identities = 137/197 (70%), Gaps = 6/197 (3%)
Strand=Plus/Plus
Query 33180 CTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATA 33239
|||| || ||||||||||| || | || || || || | || || ||| ||| |
Sbjct 214104 CTTTCTGGATATTGTAATCGGAAAGGGTGCGTCCATCTTCTAGCTGTTTGCCAGCAAAAA 214163
Query 33240 TTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATC---GCCTGTTTTACTG 33296
| || | |||||| || | || || |||||||| || ||| |||| | ||
Sbjct 214164 TCAATCTTTGCTGATCTGGAGGAATTCCTTCTTTATCTTGGATCTTTGCCT---TAACAT 214220
Query 33297 TTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTA 33356
||| ||| ||||| ||||| ||| || || || || ||||| ||||| | |||||| |
Sbjct 214221 TTTCAATTGTGTCTGAGGGTTCAACCTCAAGGGTAATTGTTTTACCCGTCAAAGTTTTCA 214280
Query 33357 CGAAAATTTGCATGTTT 33373
| ||||||||||| |||
Sbjct 214281 CAAAAATTTGCATATTT 214297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318713352068226
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |