Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq3500 95.1 1e-14 >seq3500 Length=8023 Score = 95.1 bits (104), Expect = 1e-14 Identities = 155/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 7013 ACTGCCTGGTTTGCTTGTGAACCGGAATGAGGTTGAACGTTTGCGAAATTGCAACTAAAC 7072 ||||| || ||||| || ||||| |||| ||||||||||||||| || || || |||| Sbjct 5288 ACTGCTTGATTTGCCTGAGAACCAGAATAAGGTTGAACGTTTGCAAATTTAACACCAAAC 5229 Query 7073 AGTTCTTTAG-CACGCTCAATTGCCAGGTTCTCGATTTCATCGGCTTTTACGCAGCCGCC 7131 |||| | || | ||| || || || | |||| ||||| | | | | || || | Sbjct 5228 AGTT-TACAGAGCCTCTCTATAGCTAGACTTTCGACCTCATCCACATATTCACAACCACA 5170 Query 7132 ATAATACCGTTTGCCCGGATATCCCTCAGCATACTTGTTGGTAAAAATAGAACCCTGTGC 7191 ||||||| ||| || ||||| || || ||||| || || || | || ||| || ||||| Sbjct 5169 GTAATACCTTTTCCCTGGATAACCTTCCGCATATTTATTAGTCAGAAAAGAGCCTTGTGC 5110 Query 7192 TTTCATAACATCGTCTGACACATAGTTTTCGGACGCAATCA 7232 | ||| || | | ||| | ||||| || ||||||| Sbjct 5109 CTCCATCACTGCTTTACTTACAAAATTTTCTGATGCAATCA 5069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555248399484520