Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq33 145 7e-30
>seq33
Length=2490231
Score = 145 bits (160), Expect = 7e-30
Identities = 146/187 (78%), Gaps = 2/187 (1%)
Strand=Plus/Minus
Query 13420 AATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTG 13479
||||||||||||||| | ||| || ||||| || || |||| ||||||||| || |||||
Sbjct 181688 AATATAAGTATCTATGAGTAAACTGTACATCTCAGAGTGAACATTTTCCATTGCAATTTG 181629
Query 13480 GAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTC-GGAGTAAAATCTTTCTGCTA 13538
|||||| ||||||||||| || || | ||| |||||||| || | ||| || || |||
Sbjct 181628 GAAACCGTAAAAACATCTTGCTTCAGTTACTTGAACTTCTTGACT-AAACCTCTCAACTA 181570
Query 13539 AGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAtt 13598
||||||| ||||| || || ||| |||||||| ||||| | || || |||||| |
Sbjct 181569 AGTTTTCATTAACAATTCCATCAGAGGCAGCAAAGAAAGCCAATACATGAGAAATAAAAT 181510
Query 13599 ttttttC 13605
||||||
Sbjct 181509 GTTTTTC 181503
Score = 89.7 bits (98), Expect = 4e-13
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 12983 CTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTT 13042
|| ||||||||||||||||| ||||||||||||| || || |||||||| || | || |
Sbjct 182929 CTATCAGCAACAAACTCTATATACTGTTTCATTAGCTCGCAATTCATTCCAATCATTTCT 182870
Query 13043 ACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTC 13089
|| |||| |||||||| | ||| | || || ||| | ||||| ||
Sbjct 182869 ACTGGCAAGGCTTCTGTGAGAAATTCCTTCTCAATAACCACTGCATC 182823
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430895537786874
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |