Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_005284.1
Length=54865
Score E
Sequences producing significant alignments: (Bits) Value
seq1601 228 3e-55
>seq1601
Length=30922
Score = 228 bits (252), Expect = 3e-55
Identities = 384/547 (70%), Gaps = 9/547 (2%)
Strand=Plus/Plus
Query 22197 CCCTGGATCGGCGGCAAGCGTCGACTCGCTGACCACATCATCCCGCGCTTTCCGAAGCAC 22256
|||||||| ||||| || || ||||| || | || || | |||||||| ||| |||
Sbjct 8271 CCCTGGATAGGCGGTAAACGGCGACTGGCAAAACAGATTTTACCGCGCTTCCCGGCGCAT 8330
Query 22257 GACTGTTACGTCGAGGTGTTCGCGGGCGGGGCGGCGCTGTACTTCATGC-GACCGCCAGC 22315
||| ||||| ||| || |||| ||||||||| | ||| ||| | ||||
Sbjct 8331 ACCTGCTACGTGGAGCCATTTTGTGGCGCGGCGGCGCTCTTCTTTATGAAGTTACCCAGT 8390
Query 22316 CAGGGTCGAGGTGATCAACGATATCAACGGCGAGCTGGTGAACCTGTATCGCGTCGTTCA 22375
||| |||||||| ||||||||||||||||||||||| || || ||||| || | |
Sbjct 8391 AAGGCG-GAGGTGATTAACGATATCAACGGCGAGCTGGTCAATCTCTATCGGGTGCTGAA 8449
Query 22376 GCACCATCTCGAAGAGTTCGTGCGTCAGTTCAAATGGGCGCTGACGAGCCGGCAGGTGTT 22435
|||||||| |||||||| |||| ||||| |||||||||||| |||||| | |||
Sbjct 8450 ACACCATCTGGAAGAGTTTATGCGCCAGTTTAAATGGGCGCTGGTCAGCCGGGCGATGTA 8509
Query 22436 CGAGTGGCTGAAGCATACGGTCCCGGAAACCCTCACCGACATCCAG-CGTGCGGCACGCT 22494
| ||| | || |||| | || ||| | ||||| | || || ||||| | |
Sbjct 8510 TCAATGGTTAAACATTACGCCGACCGAGACCTTAACCGATAGGAAGCCGCGCGGCCTGTT 8569
Query 22495 TCTACTACCTGCAAAAA-AGTTGCTTTGGCGGGAAGCTTGAAGGGCAGACGTTCGGAACG 22553
|||| |||||||||||| || | || ||||| || | | | || || ||||| |
Sbjct 8570 TCTATTACCTGCAAAAACAGGCG-TTCGGCGGTAAAGTCGCCGAACACACCTTCGGCATT 8628
Query 22554 GCGACGACTACGGTGCCGGGCCTGAACCTGCTGCGCATCGAAGAAGAGCTATCGGCGGCG 22613
|| || || | | ||| ||||||||||||| ||||| ||||| ||||| ||| ||
Sbjct 8629 GCCACCACCAGAGGGCCACGCCTGAACCTGCTACGCATGGAAGAGGAGCTGTCGCTCGCT 8688
Query 22614 CACATTCG--TCTCGCGAATGCGTACATCGAGCGGCTCGATTGGGCGACCTGCATCGATC 22671
|| | || | || || | | ||| || | |||||||| | |||||||| | |
Sbjct 8689 CATCTGCGATTGTCACGCA--CCACCATTGAACAAATCGATTGGTCAACCTGCATTGCCC 8746
Query 22672 GTTACGATCGGCCGCACACGCTGTTCTACCTTGATCCGCCGTACTTCGAGACTGAAGGGT 22731
|||| || || ||||||||||| || ||| ||| |||||||| | | ||||| || |
Sbjct 8747 GTTATGACCGTCCGCACACGCTCTTTTACTGTGACCCGCCGTATTGGGGTACTGAGGGCT 8806
Query 22732 ACGGCGT 22738
| |||||
Sbjct 8807 ATGGCGT 8813
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 175411946384238
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |