Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_005344.1
Length=39043
Score E
Sequences producing significant alignments: (Bits) Value
seq1206 464 2e-126
seq8203 113 1e-20
seq4809 96.9 9e-16
seq5862 89.7 1e-13
>seq1206
Length=31275
Score = 464 bits (514), Expect = 2e-126
Identities = 968/1431 (68%), Gaps = 8/1431 (1%)
Strand=Plus/Plus
Query 6836 ATGCCGATTCAGCAACTTCCGCTTATGAAAGGTGTCGGCAAAGACTTCCGAAACGCCGAC 6895
|||||||| || |||||||| || || || || || || ||| ||||||| |||| |||
Sbjct 25841 ATGCCGATACAACAACTTCCCCTGATTAAGGGCGTTGGAAAAAACTTCCGGGACGCTGAC 25900
Query 6896 TATATCGACTATCTGCCAGTGAATATGTTGGCTACACCAAAAGAAATCCTTAACAGCAGC 6955
||| | || || || || ||||||||||| ||||| | || | || |||||||||
Sbjct 25901 TATGTTGATCTGCTTCCGGTCAATATGTTGGCGACACCCAGGCAAGTGCTGAACAGCAGC 25960
Query 6956 GGATATCTTCGCTCATTCCCGGGCATTGCCAAACGTTCTGATGTGAACGGCGTATCGCGT 7015
|||||| | ||||||||||| ||||| | ||| || || ||||| || ||||||||
Sbjct 25961 GGATATTTGCGCTCATTCCCCGGCATAGACAAGCGATCGGATGTTGCAGGTATATCGCGT 26020
Query 7016 GGCGTCGAGTACAACATGGCGCAGAATGCTGTTTATCGCGTGTGTGGTGGCAAGCTGTAC 7075
|||| || ||||| || |||||||| || |||||||| ||||| || | |||||
Sbjct 26021 GGCGCAATGTTCAACACTGCTCAGAATGCCGTATATCGCGTTTGTGGAGGTAGTCTGTAT 26080
Query 7076 AAAGGCGAAAGCGAGGTCGGTGATGTTG-CCGGAAGTGGTCGCGTATCAATGGCGCATGG 7134
|||| | ||| ||| |||| | || |||||| || | ||||||||| |
Sbjct 26081 CGTGGCGCGTCGGTGGTTGGT-TCGTTGTCTGGCTCTGGTCGTGTGCCGATGGCGCATAG 26139
Query 7135 TAGGACATCACAGGCAGTAGGCGTTAATGGTCAACTGGTCGAGTATCGCTATGATGGCAC 7194
| | || ||||| || ||| ||||| | || | ||| |||| ||||||||
Sbjct 26140 CCGCAACTCTCAGGCGGTGATCGTCGGCGGTCAGGTTGTGCAATATGGCTACGATGGCAC 26199
Query 7195 GGTTAAAACCGTCTCAAACTGGCCTACAGACAGCGGATTCACGCAGTATGAGTTAGGCTC 7254
||| ||||| || | ||||||||| | || || |||||||||| || | |||||
Sbjct 26200 GGTGAAAACTGTTGCTAACTGGCCTGTATCGAGTGGCACCACGCAGTATCAGCTGGGCTC 26259
Query 7255 AGTCCGCGACAT-TACTCGCTTACGTGGGCGTTATGCGTGGTCAAAAGACGGCACTGATT 7313
| || || || | || | | ||| || || | |||||| ||||| || |||||||
Sbjct 26260 ATCGCGTGATATCTGCT-GGTCACGCGGTAACTACGTGTGGTCGAAAGATGGGACTGATT 26318
Query 7314 CATGGTTTATCACTGACCTTGAAGACGAATCGCATCCTGACCGTTACAGCGCACAATATC 7373
| | || ||| |||| | || || || | ||| || ||| | || |||| |
Sbjct 26319 CGTTTTTCATCTCTGATTTGGATGATGAGGCTTTTCCCGATAAATACCGTGCTGAATACC 26378
Query 7374 GTGCCGAGTCTCAGCCGGACGGCATCATCGGTATCGGGACATGGCGAGACTTCATCGTCT 7433
|||| ||||| || || |||||||| || ||| | || ||||||| || | | || |
Sbjct 26379 GTGCGGAGTCACAACCAGACGGCATTATTGGTGTTGGTTCATGGCGTGATATGGTTGTGT 26438
Query 7434 GCTTTGGTTCATCGACTATTGAATATTTCTCCCTGACTGGCGCAACCACCGCTGGTGCTG 7493
|||| || || | || | ||| ||||| || ||||| || | || ||| |
Sbjct 26439 GCTTCGGCACAACCACGACTGAGTATTTTTCTCTGACGGGTAACTCTGGTGCGGGTCAGG 26498
Query 7494 CTTTGTATGTCGCACAGCCATCACTGATGGTGCAAAAAGGCATCGCCGGGACTTACTGCA 7553
| | || |||| | || | ||||| |||||| || || ||||| | ||||
Sbjct 26499 CGGTATACATCGCTAACCCGGCGTACATGGTCACAAAAGGGATAGCTGGGACGTTTTGCA 26558
Query 7554 AAACGCCGTTTGCTGATTCGTATGCGTTCATCAGCAATCCGGCAACGGGTGCGCCGTCTG 7613
| |||||| || | | || | |||||||| |||||||| || || |||||||
Sbjct 26559 AGTGCCCGTTTATGGACGCATTCGCCATTATCAGCAACCCGGCAACAGGCGCACCGTCTG 26618
Query 7614 TGTATATCATCGGCTCCGGTCAGGTGTCACCAATCGCCAGCGCGAGCATTGAGAAAATCC 7673
| || | || | ||| ||||||| ||| ||||| || | | |||||||| |
Sbjct 26619 TCTACCTGATTGACTCTGGTCAGGCCAAACCCATCGCATCAGCAACGACTGAGAAAACGC 26678
Query 7674 TCCGCTCCTACACTGCTGATGAACTGGCTGATGGTGTGATGGAATCTCTGCGGTTTGATG 7733
| ||| |||||| | ||| || | ||| || ||||| || |||| || ||
Sbjct 26679 TACGCGAATACACTAACGCTGAGCTATCAACTGGCGTCATGGAGTCATTGCGTTTCGACT 26738
Query 7734 CTCATGAGTTGCTGATTATCCACCTTCCTCGCCATGTTCTCGTGTACGACGCATCTTCAA 7793
|||| || |||||||||||||||| || || ||||| || |||| || | || |
Sbjct 26739 CTCACGAACTGCTGATTATCCACCTGCCACGTCATGTGCTGGTGTTTGATTCGTCGGTGA 26798
Query 7794 GCGCCAATGGTCCGCAATGGTGTGTACTGAAAACAGGCTTGTATGACGATGTGTACCGCG 7853
||| | ||||| || ||| | |||||||| ||| ||| ||| || |||||||| |
Sbjct 26799 GCGAGAGCGGTCCACAGTGGGCCATCCTGAAAACGGGCCTGTTTGATGACGTGTACCGTG 26858
Query 7854 CTATCGACTTCATTTACGAAGGAAATCAGATAACGTGCGGCGATAAGCTGGAATCGGTGA 7913
|| || ||| | |||||||| || || ||||| || ||||||||||| ||||
Sbjct 26859 GGATTGATTTCTTCTACGAAGGCGGCGCTATCACATGCGGTGACAAGCTGGAATCTGTGA 26918
Query 7914 CCGGGAAATTGCAGTTCGATATCAGCAG-TCAGTATGGGCTTCAACAGGAACACCTGCTG 7972
|||| | | | || | ||| | | || |||| |||||||| ||| ||||
Sbjct 26919 CCGGACAGCTTAATTTTG-CATCGTCTGCCCAATATGACAAACAACAGGAGCACTTGCTC 26977
Query 7973 TTTACTCCACTGTTCAAAGCGGATAACGCCAGATGCTTCGATCTGGAGGTGGAATCATCC 8032
| | | || || |||| ||||| ||||| ||| ||||| || ||| | ||| |||
Sbjct 26978 TATTCCCCGCTCATCAAGGCGGACAACGCGAGACTGTTCGACCTCGAGCTTGAAGTATCG 27037
Query 8033 ACTGGCGTAGCTCAGTACGCCGACCGCCTGTTCCTCTCTGCAACCACTGACGGCATCAAT 8092
|| ||||| ||||| | ||| || || ||||| ||||| | |||||||| ||||||||
Sbjct 27038 ACGGGCGTTGCTCAATTCGCTGAACGGCTGTTTATCTCTACCACCACTGATGGCATCAAC 27097
Query 8093 TACGGGCGTGAGCAGATGATTGAGCAGAATGAACCGTTCGTTTATGACAAACGTGTTTTG 8152
||||| | || || ||| | | ||||| ||||||| |||||| | | | |
Sbjct 27098 TACGGCAGGGAACAAATGGTGCCGTGGAATGCACCGTTCCGCTATGACCAGAGGGCGCTA 27157
Query 8153 TGGAAGCGAGTCGGGCGCATCAGGAAAAATGTCGGCTTCAAATTGCGCGTTATCACGAAG 8212
||| || | ||||| | | ||||| |||||||||| || | |||| || ||
Sbjct 27158 TGGCGTCGGATTGGGCGTGTGCGCAAAAACATCGGCTTCAAGTTCAGAATTATTACTAAA 27217
Query 8213 TCACCTGTCACTCTGTCTGGCGCT-CAGATAAGGATTGAGTAATGGCGGAT 8262
|| || || || || || ||| || | ||| |||||| ||||| |||
Sbjct 27218 AGCCCGGTAACCCTATCAGG-GCTACAAGTGAGGGTTGAGTGATGGCTGAT 27267
Score = 131 bits (144), Expect = 4e-26
Identities = 216/308 (70%), Gaps = 4/308 (1%)
Strand=Plus/Minus
Query 9970 CCAGATGAGCAATTACAACAATCTGGCAAACGTTGGGCTTGGTGCTCTGCAAGGTCAGGC 10029
|||||||| ||| |||||| |||||||| | || | || || ||||||| || ||
Sbjct 29173 CCAGATGAATAATGCGAACAATTTGGCAAACATCGGATTGGGAGCATTGCAAGGGCAAGC 29114
Query 10030 AAACGCCGGGCAGACGTACGCCAACAACA-TGAGCAGC-ATTGCACAGCAAAGCGCAGCT 10087
||||| || || || ||| ||||||||| || |||| |||||| ||| | ||| ||
Sbjct 29113 CAACGCAGGTCAAACCTACACCAACAACACTGGGCAGTTATTGCA--GCAGAACGCGGCG 29056
Query 10088 CTTGCCGCTGCTAATGCCAACAAACCATCAAGTCTTCAGACAGCAATTAGTGGCGGAACG 10147
|| ||||| || || || || | ||||| || ||| | |||| |||||||
Sbjct 29055 CTCGCCGCGGCCAACGCTAATAGGCCATCGGCGCTACAGCAGGGAATTTCTGGCGGATTT 28996
Query 10148 TCTGGTGCGATTGCCGGTGCAGGTCTTGCCAGCCTTTTGGAAACATCAACACCTTGGGGA 10207
|||||| |||| || | || ||| || | ||| | || || || |||||
Sbjct 28995 GGTGGTGCTCTTGCTGGCGGCGGCATTGTTAGTGCTCTGGGCATGTCTACGCCGTGGGGG 28936
Query 10208 GCTGGCATTGGTGCTGGTATCGGATTGCTTAGCTCGTTGTTTTAAGGGGTAATCATGGCT 10267
||||| || ||||| || |||||| | | ||||| | |||||||| || | |||||||
Sbjct 28935 GCTGGTATCGGTGCAGGCATCGGAATTTTAGGCTCGCTATTTTAAGGTGTGAACATGGCT 28876
Query 10268 ACTTGGCA 10275
||||||||
Sbjct 28875 ACTTGGCA 28868
>seq8203
Length=1368
Score = 113 bits (124), Expect = 1e-20
Identities = 216/313 (69%), Gaps = 19/313 (6%)
Strand=Plus/Plus
Query 22194 TCCTTGAGTTTTGCCCTGTGCCATCCCTGCTTTTTATC----GAG-AGATGTTTGTGCGA 22248
||||||| | ||| ||| ||||||||| ||||| || ||| ||||| || |
Sbjct 313 TCCTTGAATGACGCCTTGTTCCATCCCTGTTTTTTCTCAGTCGAGCAGATG-----GCAA 367
Query 22249 AACCTTCCTCAAGGTTATACAGATACCGACCGATTCCCCACTGAACGGCAGCGCGCTTCA 22308
|| || || || || ||||| |||||||| |||||||||| || || |||||||
Sbjct 368 AATTCTCTTCCAGTGAGTAGAGATATCGACCGATCCCCCACTGAAAAGCTGCTCGCTTCA 427
Query 22309 TTGCACCGGAACGACCACCTTTTACGGCTTCTACCTGCGTGTTTTCAGCAGCATCCCATT 22368
||| || || ||||| || || || || ||||| || || || || | ||||| |
Sbjct 428 TTGAGCCAGACATGCCACCCTTAACCGCCTCCACCTGTGTTTTATCTGCGCCGTCCCACT 487
Query 22369 TGGTTACCCATTCGGAATCAATCCTGATTGATATGCCGCATTCAACGCCTCCGTT--GTT 22426
| |||||||| || | ||| | || ||||||| || |||||| || | ||
Sbjct 488 TCGTTACCCACTCATCACGAATACGAATGAATATGCCACACATAACGCCGCCATCAGGTC 547
Query 22427 GGGAATATCGCGGTATTCATTGCGCCA-TCCTGCTTTGCCGCAAACATCGTCCAGGCGTT 22485
|| | | | ||||||| ||| | || |||| || ||||| |||||||| ||||
Sbjct 548 CGGGAGA-----GAATTCATTTTTCCAATTCT-CTTTTCCACAAACGTCGTCCAGTCGTT 601
Query 22486 TCATGATTGCCCG 22498
||||||| |||||
Sbjct 602 TCATGATGGCCCG 614
>seq4809
Length=3389
Score = 96.9 bits (106), Expect = 9e-16
Identities = 242/363 (67%), Gaps = 10/363 (3%)
Strand=Plus/Plus
Query 31919 TCAAATCAAATACGCCAGCACACGACAAGGACTGCTGGCAAACGCCGCTTTGGCTTTTTG 31978
|||||||| | || | || | |||||||| |||| ||| |||| | | |||
Sbjct 71 TCAAATCACACACCAGACCAGAGCACAAGGACACATGGCGAACCCCGCCCGAGGTCTTTC 130
Query 31979 ATGCACTGGATATTGAGTTTGGATTCTGGCTGGATTCGGCAGCGAGCGACAAAAATGCTC 32038
| || |||||| |||||||| |||| || ||| | || ||| | || | ||| | |
Sbjct 131 AGGCGCTGGATGCGGAGTTTGGCTTCTACCTCGATGCCGCCGCGGACCACGACAATACCC 190
Query 32039 TGTGTGCTCACTGGCTAACTTAGGCC----GACGACGCGCTCAATTCTGAGTGGGTAAGC 32094
||||| || || || || | ||| || || || || | ||| ||| |||
Sbjct 191 TGTGTCGTC--TG--TATCTGACGCCAGAGGATGATGCCCTTGCCTGTGACTGGAGTAGC 246
Query 32095 CACGGTGCAATCTGGAATAACCCACCGTACAGCAATATCAGGCCGTGGGTGGAAAAAGCC 32154
||| || |||| || || ||||||||||||||| | || ||||| || |||||
Sbjct 247 ACCGGCGCCATCTTCTGCAATCCCCCGTACAGCAATATCCGCCCCTGGGTTGATAAAGCT 306
Query 32155 GCTGAGCAGTGCATACAACAGCGACAGACGGTAGTTATGCTTGTGCCAGAGGATATATCA 32214
||||||||| || | ||| | ||||| |||||||| |||| | ||||| ||
Sbjct 307 GCTGAGCAGAGCCGCAAGCAGAATAAAACGGTCGTTATGCTGCTGCCTGCGGATACCTCG 366
Query 32215 GTCGGATGGTTCAGCA-AGGCTCTGGAGAGTGTCGACGAAGTTCGCATTATCACTGATGG 32273
||||||||| ||| ||||| | | | || || || || ||| | ||||| || ||
Sbjct 367 ACGGGATGGTTC-GCACTGGCTCAGAAAACGGTTGATGAGGTGCGCTTCATCACCGAAGG 425
Query 32274 ACG 32276
||
Sbjct 426 GCG 428
>seq5862
Length=3465
Score = 89.7 bits (98), Expect = 1e-13
Identities = 226/339 (67%), Gaps = 10/339 (3%)
Strand=Plus/Plus
Query 31943 ACAAGGACTGCTGGCAAACGCCGCTTTGGCTTTTTGATGCACTGGATATTGAGTTTGGAT 32002
|||||||| |||| ||| |||| | | || | || |||||| |||||||| |
Sbjct 23 ACAAGGACACATGGCGAACCCCGCACGAGGTCTTCCAGGCGCTGGATGCGGAGTTTGGCT 82
Query 32003 TCTGGCTGGATTCGGCAGCGAGCGACAAAAATGCTCTGTGTGCTCACTGGCTAACTTAGG 32062
||| || ||| | || ||| | || | ||| | |||||| || || || || | |
Sbjct 83 TCTACCTCGATGCCGCCGCGGACCACGACAATACCCTGTGTCGTC--TG--TATCTGACG 138
Query 32063 CC----GACGACGCGCTCAATTCTGAGTGGGTAAGCCACGGTGCAATCTGGAATAACCCA 32118
|| || || || || | ||| ||| ||| ||| || |||| || ||
Sbjct 139 CCAGAGGATGATGCCCTTGCCTGTGACTGGAGTAGCACCGGCGCCATCTTCTGCAATCCC 198
Query 32119 CCGTACAGCAATATCAGGCCGTGGGTGGAAAAAGCCGCTGAGCAGTGCATACAACAGCGA 32178
||||||||||||||| | || ||||| || ||||| ||||||||| || | |||
Sbjct 199 CCGTACAGCAATATCCGCCCCTGGGTTGATAAAGCTGCTGAGCAGAGCCGCAAGCAGAAT 258
Query 32179 CAGACGGTAGTTATGCTTGTGCCAGAGGATATATCAGTCGGATGGTTCAGCA-AGGCTCT 32237
| ||||| |||||||| |||| | ||||| || ||||||||| ||| |||| |
Sbjct 259 AAAACGGTCGTTATGCTGCTGCCTGCGGATACCTCGACGGGATGGTTC-GCACAGGCACA 317
Query 32238 GGAGAGTGTCGACGAAGTTCGCATTATCACTGATGGACG 32276
| | | || || || || ||| | ||||| || || ||
Sbjct 318 GAAAACGGTTGATGAGGTGCGCTTCATCACCGAAGGGCG 356
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124791489023970
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