Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_005344.1 Length=39043 Score E Sequences producing significant alignments: (Bits) Value seq1206 464 2e-126 seq8203 113 1e-20 seq4809 96.9 9e-16 seq5862 89.7 1e-13 >seq1206 Length=31275 Score = 464 bits (514), Expect = 2e-126 Identities = 968/1431 (68%), Gaps = 8/1431 (1%) Strand=Plus/Plus Query 6836 ATGCCGATTCAGCAACTTCCGCTTATGAAAGGTGTCGGCAAAGACTTCCGAAACGCCGAC 6895 |||||||| || |||||||| || || || || || || ||| ||||||| |||| ||| Sbjct 25841 ATGCCGATACAACAACTTCCCCTGATTAAGGGCGTTGGAAAAAACTTCCGGGACGCTGAC 25900 Query 6896 TATATCGACTATCTGCCAGTGAATATGTTGGCTACACCAAAAGAAATCCTTAACAGCAGC 6955 ||| | || || || || ||||||||||| ||||| | || | || ||||||||| Sbjct 25901 TATGTTGATCTGCTTCCGGTCAATATGTTGGCGACACCCAGGCAAGTGCTGAACAGCAGC 25960 Query 6956 GGATATCTTCGCTCATTCCCGGGCATTGCCAAACGTTCTGATGTGAACGGCGTATCGCGT 7015 |||||| | ||||||||||| ||||| | ||| || || ||||| || |||||||| Sbjct 25961 GGATATTTGCGCTCATTCCCCGGCATAGACAAGCGATCGGATGTTGCAGGTATATCGCGT 26020 Query 7016 GGCGTCGAGTACAACATGGCGCAGAATGCTGTTTATCGCGTGTGTGGTGGCAAGCTGTAC 7075 |||| || ||||| || |||||||| || |||||||| ||||| || | ||||| Sbjct 26021 GGCGCAATGTTCAACACTGCTCAGAATGCCGTATATCGCGTTTGTGGAGGTAGTCTGTAT 26080 Query 7076 AAAGGCGAAAGCGAGGTCGGTGATGTTG-CCGGAAGTGGTCGCGTATCAATGGCGCATGG 7134 |||| | ||| ||| |||| | || |||||| || | ||||||||| | Sbjct 26081 CGTGGCGCGTCGGTGGTTGGT-TCGTTGTCTGGCTCTGGTCGTGTGCCGATGGCGCATAG 26139 Query 7135 TAGGACATCACAGGCAGTAGGCGTTAATGGTCAACTGGTCGAGTATCGCTATGATGGCAC 7194 | | || ||||| || ||| ||||| | || | ||| |||| |||||||| Sbjct 26140 CCGCAACTCTCAGGCGGTGATCGTCGGCGGTCAGGTTGTGCAATATGGCTACGATGGCAC 26199 Query 7195 GGTTAAAACCGTCTCAAACTGGCCTACAGACAGCGGATTCACGCAGTATGAGTTAGGCTC 7254 ||| ||||| || | ||||||||| | || || |||||||||| || | ||||| Sbjct 26200 GGTGAAAACTGTTGCTAACTGGCCTGTATCGAGTGGCACCACGCAGTATCAGCTGGGCTC 26259 Query 7255 AGTCCGCGACAT-TACTCGCTTACGTGGGCGTTATGCGTGGTCAAAAGACGGCACTGATT 7313 | || || || | || | | ||| || || | |||||| ||||| || ||||||| Sbjct 26260 ATCGCGTGATATCTGCT-GGTCACGCGGTAACTACGTGTGGTCGAAAGATGGGACTGATT 26318 Query 7314 CATGGTTTATCACTGACCTTGAAGACGAATCGCATCCTGACCGTTACAGCGCACAATATC 7373 | | || ||| |||| | || || || | ||| || ||| | || |||| | Sbjct 26319 CGTTTTTCATCTCTGATTTGGATGATGAGGCTTTTCCCGATAAATACCGTGCTGAATACC 26378 Query 7374 GTGCCGAGTCTCAGCCGGACGGCATCATCGGTATCGGGACATGGCGAGACTTCATCGTCT 7433 |||| ||||| || || |||||||| || ||| | || ||||||| || | | || | Sbjct 26379 GTGCGGAGTCACAACCAGACGGCATTATTGGTGTTGGTTCATGGCGTGATATGGTTGTGT 26438 Query 7434 GCTTTGGTTCATCGACTATTGAATATTTCTCCCTGACTGGCGCAACCACCGCTGGTGCTG 7493 |||| || || | || | ||| ||||| || ||||| || | || ||| | Sbjct 26439 GCTTCGGCACAACCACGACTGAGTATTTTTCTCTGACGGGTAACTCTGGTGCGGGTCAGG 26498 Query 7494 CTTTGTATGTCGCACAGCCATCACTGATGGTGCAAAAAGGCATCGCCGGGACTTACTGCA 7553 | | || |||| | || | ||||| |||||| || || ||||| | |||| Sbjct 26499 CGGTATACATCGCTAACCCGGCGTACATGGTCACAAAAGGGATAGCTGGGACGTTTTGCA 26558 Query 7554 AAACGCCGTTTGCTGATTCGTATGCGTTCATCAGCAATCCGGCAACGGGTGCGCCGTCTG 7613 | |||||| || | | || | |||||||| |||||||| || || ||||||| Sbjct 26559 AGTGCCCGTTTATGGACGCATTCGCCATTATCAGCAACCCGGCAACAGGCGCACCGTCTG 26618 Query 7614 TGTATATCATCGGCTCCGGTCAGGTGTCACCAATCGCCAGCGCGAGCATTGAGAAAATCC 7673 | || | || | ||| ||||||| ||| ||||| || | | |||||||| | Sbjct 26619 TCTACCTGATTGACTCTGGTCAGGCCAAACCCATCGCATCAGCAACGACTGAGAAAACGC 26678 Query 7674 TCCGCTCCTACACTGCTGATGAACTGGCTGATGGTGTGATGGAATCTCTGCGGTTTGATG 7733 | ||| |||||| | ||| || | ||| || ||||| || |||| || || Sbjct 26679 TACGCGAATACACTAACGCTGAGCTATCAACTGGCGTCATGGAGTCATTGCGTTTCGACT 26738 Query 7734 CTCATGAGTTGCTGATTATCCACCTTCCTCGCCATGTTCTCGTGTACGACGCATCTTCAA 7793 |||| || |||||||||||||||| || || ||||| || |||| || | || | Sbjct 26739 CTCACGAACTGCTGATTATCCACCTGCCACGTCATGTGCTGGTGTTTGATTCGTCGGTGA 26798 Query 7794 GCGCCAATGGTCCGCAATGGTGTGTACTGAAAACAGGCTTGTATGACGATGTGTACCGCG 7853 ||| | ||||| || ||| | |||||||| ||| ||| ||| || |||||||| | Sbjct 26799 GCGAGAGCGGTCCACAGTGGGCCATCCTGAAAACGGGCCTGTTTGATGACGTGTACCGTG 26858 Query 7854 CTATCGACTTCATTTACGAAGGAAATCAGATAACGTGCGGCGATAAGCTGGAATCGGTGA 7913 || || ||| | |||||||| || || ||||| || ||||||||||| |||| Sbjct 26859 GGATTGATTTCTTCTACGAAGGCGGCGCTATCACATGCGGTGACAAGCTGGAATCTGTGA 26918 Query 7914 CCGGGAAATTGCAGTTCGATATCAGCAG-TCAGTATGGGCTTCAACAGGAACACCTGCTG 7972 |||| | | | || | ||| | | || |||| |||||||| ||| |||| Sbjct 26919 CCGGACAGCTTAATTTTG-CATCGTCTGCCCAATATGACAAACAACAGGAGCACTTGCTC 26977 Query 7973 TTTACTCCACTGTTCAAAGCGGATAACGCCAGATGCTTCGATCTGGAGGTGGAATCATCC 8032 | | | || || |||| ||||| ||||| ||| ||||| || ||| | ||| ||| Sbjct 26978 TATTCCCCGCTCATCAAGGCGGACAACGCGAGACTGTTCGACCTCGAGCTTGAAGTATCG 27037 Query 8033 ACTGGCGTAGCTCAGTACGCCGACCGCCTGTTCCTCTCTGCAACCACTGACGGCATCAAT 8092 || ||||| ||||| | ||| || || ||||| ||||| | |||||||| |||||||| Sbjct 27038 ACGGGCGTTGCTCAATTCGCTGAACGGCTGTTTATCTCTACCACCACTGATGGCATCAAC 27097 Query 8093 TACGGGCGTGAGCAGATGATTGAGCAGAATGAACCGTTCGTTTATGACAAACGTGTTTTG 8152 ||||| | || || ||| | | ||||| ||||||| |||||| | | | | Sbjct 27098 TACGGCAGGGAACAAATGGTGCCGTGGAATGCACCGTTCCGCTATGACCAGAGGGCGCTA 27157 Query 8153 TGGAAGCGAGTCGGGCGCATCAGGAAAAATGTCGGCTTCAAATTGCGCGTTATCACGAAG 8212 ||| || | ||||| | | ||||| |||||||||| || | |||| || || Sbjct 27158 TGGCGTCGGATTGGGCGTGTGCGCAAAAACATCGGCTTCAAGTTCAGAATTATTACTAAA 27217 Query 8213 TCACCTGTCACTCTGTCTGGCGCT-CAGATAAGGATTGAGTAATGGCGGAT 8262 || || || || || || ||| || | ||| |||||| ||||| ||| Sbjct 27218 AGCCCGGTAACCCTATCAGG-GCTACAAGTGAGGGTTGAGTGATGGCTGAT 27267 Score = 131 bits (144), Expect = 4e-26 Identities = 216/308 (70%), Gaps = 4/308 (1%) Strand=Plus/Minus Query 9970 CCAGATGAGCAATTACAACAATCTGGCAAACGTTGGGCTTGGTGCTCTGCAAGGTCAGGC 10029 |||||||| ||| |||||| |||||||| | || | || || ||||||| || || Sbjct 29173 CCAGATGAATAATGCGAACAATTTGGCAAACATCGGATTGGGAGCATTGCAAGGGCAAGC 29114 Query 10030 AAACGCCGGGCAGACGTACGCCAACAACA-TGAGCAGC-ATTGCACAGCAAAGCGCAGCT 10087 ||||| || || || ||| ||||||||| || |||| |||||| ||| | ||| || Sbjct 29113 CAACGCAGGTCAAACCTACACCAACAACACTGGGCAGTTATTGCA--GCAGAACGCGGCG 29056 Query 10088 CTTGCCGCTGCTAATGCCAACAAACCATCAAGTCTTCAGACAGCAATTAGTGGCGGAACG 10147 || ||||| || || || || | ||||| || ||| | |||| ||||||| Sbjct 29055 CTCGCCGCGGCCAACGCTAATAGGCCATCGGCGCTACAGCAGGGAATTTCTGGCGGATTT 28996 Query 10148 TCTGGTGCGATTGCCGGTGCAGGTCTTGCCAGCCTTTTGGAAACATCAACACCTTGGGGA 10207 |||||| |||| || | || ||| || | ||| | || || || ||||| Sbjct 28995 GGTGGTGCTCTTGCTGGCGGCGGCATTGTTAGTGCTCTGGGCATGTCTACGCCGTGGGGG 28936 Query 10208 GCTGGCATTGGTGCTGGTATCGGATTGCTTAGCTCGTTGTTTTAAGGGGTAATCATGGCT 10267 ||||| || ||||| || |||||| | | ||||| | |||||||| || | ||||||| Sbjct 28935 GCTGGTATCGGTGCAGGCATCGGAATTTTAGGCTCGCTATTTTAAGGTGTGAACATGGCT 28876 Query 10268 ACTTGGCA 10275 |||||||| Sbjct 28875 ACTTGGCA 28868 >seq8203 Length=1368 Score = 113 bits (124), Expect = 1e-20 Identities = 216/313 (69%), Gaps = 19/313 (6%) Strand=Plus/Plus Query 22194 TCCTTGAGTTTTGCCCTGTGCCATCCCTGCTTTTTATC----GAG-AGATGTTTGTGCGA 22248 ||||||| | ||| ||| ||||||||| ||||| || ||| ||||| || | Sbjct 313 TCCTTGAATGACGCCTTGTTCCATCCCTGTTTTTTCTCAGTCGAGCAGATG-----GCAA 367 Query 22249 AACCTTCCTCAAGGTTATACAGATACCGACCGATTCCCCACTGAACGGCAGCGCGCTTCA 22308 || || || || || ||||| |||||||| |||||||||| || || ||||||| Sbjct 368 AATTCTCTTCCAGTGAGTAGAGATATCGACCGATCCCCCACTGAAAAGCTGCTCGCTTCA 427 Query 22309 TTGCACCGGAACGACCACCTTTTACGGCTTCTACCTGCGTGTTTTCAGCAGCATCCCATT 22368 ||| || || ||||| || || || || ||||| || || || || | ||||| | Sbjct 428 TTGAGCCAGACATGCCACCCTTAACCGCCTCCACCTGTGTTTTATCTGCGCCGTCCCACT 487 Query 22369 TGGTTACCCATTCGGAATCAATCCTGATTGATATGCCGCATTCAACGCCTCCGTT--GTT 22426 | |||||||| || | ||| | || ||||||| || |||||| || | || Sbjct 488 TCGTTACCCACTCATCACGAATACGAATGAATATGCCACACATAACGCCGCCATCAGGTC 547 Query 22427 GGGAATATCGCGGTATTCATTGCGCCA-TCCTGCTTTGCCGCAAACATCGTCCAGGCGTT 22485 || | | | ||||||| ||| | || |||| || ||||| |||||||| |||| Sbjct 548 CGGGAGA-----GAATTCATTTTTCCAATTCT-CTTTTCCACAAACGTCGTCCAGTCGTT 601 Query 22486 TCATGATTGCCCG 22498 ||||||| ||||| Sbjct 602 TCATGATGGCCCG 614 >seq4809 Length=3389 Score = 96.9 bits (106), Expect = 9e-16 Identities = 242/363 (67%), Gaps = 10/363 (3%) Strand=Plus/Plus Query 31919 TCAAATCAAATACGCCAGCACACGACAAGGACTGCTGGCAAACGCCGCTTTGGCTTTTTG 31978 |||||||| | || | || | |||||||| |||| ||| |||| | | ||| Sbjct 71 TCAAATCACACACCAGACCAGAGCACAAGGACACATGGCGAACCCCGCCCGAGGTCTTTC 130 Query 31979 ATGCACTGGATATTGAGTTTGGATTCTGGCTGGATTCGGCAGCGAGCGACAAAAATGCTC 32038 | || |||||| |||||||| |||| || ||| | || ||| | || | ||| | | Sbjct 131 AGGCGCTGGATGCGGAGTTTGGCTTCTACCTCGATGCCGCCGCGGACCACGACAATACCC 190 Query 32039 TGTGTGCTCACTGGCTAACTTAGGCC----GACGACGCGCTCAATTCTGAGTGGGTAAGC 32094 ||||| || || || || | ||| || || || || | ||| ||| ||| Sbjct 191 TGTGTCGTC--TG--TATCTGACGCCAGAGGATGATGCCCTTGCCTGTGACTGGAGTAGC 246 Query 32095 CACGGTGCAATCTGGAATAACCCACCGTACAGCAATATCAGGCCGTGGGTGGAAAAAGCC 32154 ||| || |||| || || ||||||||||||||| | || ||||| || ||||| Sbjct 247 ACCGGCGCCATCTTCTGCAATCCCCCGTACAGCAATATCCGCCCCTGGGTTGATAAAGCT 306 Query 32155 GCTGAGCAGTGCATACAACAGCGACAGACGGTAGTTATGCTTGTGCCAGAGGATATATCA 32214 ||||||||| || | ||| | ||||| |||||||| |||| | ||||| || Sbjct 307 GCTGAGCAGAGCCGCAAGCAGAATAAAACGGTCGTTATGCTGCTGCCTGCGGATACCTCG 366 Query 32215 GTCGGATGGTTCAGCA-AGGCTCTGGAGAGTGTCGACGAAGTTCGCATTATCACTGATGG 32273 ||||||||| ||| ||||| | | | || || || || ||| | ||||| || || Sbjct 367 ACGGGATGGTTC-GCACTGGCTCAGAAAACGGTTGATGAGGTGCGCTTCATCACCGAAGG 425 Query 32274 ACG 32276 || Sbjct 426 GCG 428 >seq5862 Length=3465 Score = 89.7 bits (98), Expect = 1e-13 Identities = 226/339 (67%), Gaps = 10/339 (3%) Strand=Plus/Plus Query 31943 ACAAGGACTGCTGGCAAACGCCGCTTTGGCTTTTTGATGCACTGGATATTGAGTTTGGAT 32002 |||||||| |||| ||| |||| | | || | || |||||| |||||||| | Sbjct 23 ACAAGGACACATGGCGAACCCCGCACGAGGTCTTCCAGGCGCTGGATGCGGAGTTTGGCT 82 Query 32003 TCTGGCTGGATTCGGCAGCGAGCGACAAAAATGCTCTGTGTGCTCACTGGCTAACTTAGG 32062 ||| || ||| | || ||| | || | ||| | |||||| || || || || | | Sbjct 83 TCTACCTCGATGCCGCCGCGGACCACGACAATACCCTGTGTCGTC--TG--TATCTGACG 138 Query 32063 CC----GACGACGCGCTCAATTCTGAGTGGGTAAGCCACGGTGCAATCTGGAATAACCCA 32118 || || || || || | ||| ||| ||| ||| || |||| || || Sbjct 139 CCAGAGGATGATGCCCTTGCCTGTGACTGGAGTAGCACCGGCGCCATCTTCTGCAATCCC 198 Query 32119 CCGTACAGCAATATCAGGCCGTGGGTGGAAAAAGCCGCTGAGCAGTGCATACAACAGCGA 32178 ||||||||||||||| | || ||||| || ||||| ||||||||| || | ||| Sbjct 199 CCGTACAGCAATATCCGCCCCTGGGTTGATAAAGCTGCTGAGCAGAGCCGCAAGCAGAAT 258 Query 32179 CAGACGGTAGTTATGCTTGTGCCAGAGGATATATCAGTCGGATGGTTCAGCA-AGGCTCT 32237 | ||||| |||||||| |||| | ||||| || ||||||||| ||| |||| | Sbjct 259 AAAACGGTCGTTATGCTGCTGCCTGCGGATACCTCGACGGGATGGTTC-GCACAGGCACA 317 Query 32238 GGAGAGTGTCGACGAAGTTCGCATTATCACTGATGGACG 32276 | | | || || || || ||| | ||||| || || || Sbjct 318 GAAAACGGTTGATGAGGTGCGCTTCATCACCGAAGGGCG 356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124791489023970