Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq57 98.7 8e-16 >seq57 Length=2082711 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577 ||||||||||| ||| |||||||||||| |||||||||| | ||| | || ||| Sbjct 1620455 ACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTCC 1620514 Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637 | |||||| || | |||| | |||||||||||| || | | |||||| ||| Sbjct 1620515 AACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTGG 1620574 Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697 ||||| || | | | || ||||| | | |||| || | || || ||||| Sbjct 1620575 ATTTTGGCTTTTACATTTTCAATAGTATCAGAGGGCTCCACTTCAAGAGTAATTGTTTTT 1620634 Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || || ||||||||||||||||| ||||| Sbjct 1620635 CCAGTCAGAGTTTTCACAAAAATTTGCAT 1620663 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577 ||||||||||| ||| |||||||||||| |||||||||| | ||| | || ||| Sbjct 1619087 ACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTCC 1619146 Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637 | |||||| || | |||| | |||||||||||| || | | |||||| ||| Sbjct 1619147 AACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTGG 1619206 Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697 ||||| || | | | || ||||| | | ||| || | || || ||||| Sbjct 1619207 ATTTTGGCTTTAACATTTTCAATAGTATCAGAGGGCTCAACTTCAAGAGTAATTGTTTTT 1619266 Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || || ||||||||||| ||||| ||||| Sbjct 1619267 CCAGTCAGAGTTTTCACGAAAATTTGCAT 1619295 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577 || |||||||| ||| |||||||||||| |||||||||| | ||| | || || Sbjct 1619543 ACCAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTCT 1619602 Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637 | |||||| || | |||| | |||||||||||| || | | ||| || ||| Sbjct 1619603 AACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGAATTCCTTCTTTATCCTGG 1619662 Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697 ||||| ||| | | |||| ||||| | | ||| || | || || ||||| Sbjct 1619663 ATTTTAGCCTTTACGTTCTCTATTGTATCAGACGGCTCAACTTCAAGAGTAATAGTTTTT 1619722 Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || || ||||||||||||||||| ||||| Sbjct 1619723 CCAGTCAGAGTTTTCACAAAAATTTGCAT 1619751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421166299058537