Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq5 89.7 6e-13
>seq5
Length=4762315
Score = 89.7 bits (98), Expect = 6e-13
Identities = 145/207 (70%), Gaps = 4/207 (2%)
Strand=Plus/Plus
Query 164500 TTAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACA 164559
||||| || || ||| | || || ||| | ||| ||| ||||| || || |||||
Sbjct 2514514 TTAGGATGCAAGCATGTTAAGGGCATTCTCTTATTTGGCCCTCCGGGGACTGGGAAAACG 2514573
Query 164560 TTAATGGCTCGATGCATTGCTCAAGCTTTTAAATC--GCGACCCGTTAAAATTGTTAATG 164617
||||||| || |||| || || || | | || ||| || ||||| ||||
Sbjct 2514574 CTAATGGCCCGTCAAATTGGAAAAATGTTGAACGCTAGAGAACCG--AAGATTGTAAATG 2514631
Query 164618 GTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTC 164677
| ||| | | ||| |||||||||| ||||| |||||||| ||| |||||| | |||
Sbjct 2514632 GACCTCAGATCTTGGACAAATATGTGGGTGAATCAGAAGCAAATATTAGAAGACTATTTG 2514691
Query 164678 AGGAGGCTGAAGAAGAACAAAAGAAAG 164704
|| || |||||||||||||||| ||
Sbjct 2514692 CTGACGCAGAAGAAGAACAAAAGAGAG 2514718
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595748825809200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |