Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq5 89.7 6e-13 >seq5 Length=4762315 Score = 89.7 bits (98), Expect = 6e-13 Identities = 145/207 (70%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 164500 TTAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACA 164559 ||||| || || ||| | || || ||| | ||| ||| ||||| || || ||||| Sbjct 2514514 TTAGGATGCAAGCATGTTAAGGGCATTCTCTTATTTGGCCCTCCGGGGACTGGGAAAACG 2514573 Query 164560 TTAATGGCTCGATGCATTGCTCAAGCTTTTAAATC--GCGACCCGTTAAAATTGTTAATG 164617 ||||||| || |||| || || || | | || ||| || ||||| |||| Sbjct 2514574 CTAATGGCCCGTCAAATTGGAAAAATGTTGAACGCTAGAGAACCG--AAGATTGTAAATG 2514631 Query 164618 GTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTC 164677 | ||| | | ||| |||||||||| ||||| |||||||| ||| |||||| | ||| Sbjct 2514632 GACCTCAGATCTTGGACAAATATGTGGGTGAATCAGAAGCAAATATTAGAAGACTATTTG 2514691 Query 164678 AGGAGGCTGAAGAAGAACAAAAGAAAG 164704 || || |||||||||||||||| || Sbjct 2514692 CTGACGCAGAAGAAGAACAAAAGAGAG 2514718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595748825809200