Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq27 147 1e-30 >seq27 Length=2709680 Score = 147 bits (162), Expect = 1e-30 Identities = 175/235 (74%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 3902 GGGTTCTCGGTTGAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTG 3961 || || || || ||||||||||||||| |||||||| | || ||| | |||||||| Sbjct 669115 GGATTTTCTGTGGAGGGTCAAGAAAATTGTCAAGAAATCCTGTCTAAACAATTGTATTTG 669174 Query 3962 TGTCAATGTTTAATTGCATTGATG-ATCATACGAATTGGTGGTCATTGTGTTATCAAATT 4020 || || | |||| | ||||| ||| || |||||| || || |||| ||| |||| | Sbjct 669175 TGCCAGTTTTTAGTAGCATT-ATGTATAGTACGAAATGAGGGACATTTTGTATGCAAAGT 669233 Query 4021 TTTCGATATATTTACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTTAA 4080 || || |||||||||| |||||||| |||||||| ||||| ||||| || | || || Sbjct 669234 ATTTGACTTATTTACACCATTTAGTGCAGGTTTAGTTTATTTAATGTACCGAGCATTCAA 669293 Query 4081 TCGTATTTGTATTTTCAAACCACATTCATCGCGACCGGCCAATTCTGAAAGATAT 4135 |||||||| || |||||| || || ||||| || ||||| ||||| ||| Sbjct 669294 AGAAATTTGTATATTTAAACCAAATACAAGTCGACCTGCAAATTCAGAAAGGTAT 669348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276497862091111