Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_005905.1
Length=86462
Score E
Sequences producing significant alignments: (Bits) Value
seq27 147 1e-30
>seq27
Length=2709680
Score = 147 bits (162), Expect = 1e-30
Identities = 175/235 (74%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 3902 GGGTTCTCGGTTGAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTG 3961
|| || || || ||||||||||||||| |||||||| | || ||| | ||||||||
Sbjct 669115 GGATTTTCTGTGGAGGGTCAAGAAAATTGTCAAGAAATCCTGTCTAAACAATTGTATTTG 669174
Query 3962 TGTCAATGTTTAATTGCATTGATG-ATCATACGAATTGGTGGTCATTGTGTTATCAAATT 4020
|| || | |||| | ||||| ||| || |||||| || || |||| ||| |||| |
Sbjct 669175 TGCCAGTTTTTAGTAGCATT-ATGTATAGTACGAAATGAGGGACATTTTGTATGCAAAGT 669233
Query 4021 TTTCGATATATTTACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTTAA 4080
|| || |||||||||| |||||||| |||||||| ||||| ||||| || | || ||
Sbjct 669234 ATTTGACTTATTTACACCATTTAGTGCAGGTTTAGTTTATTTAATGTACCGAGCATTCAA 669293
Query 4081 TCGTATTTGTATTTTCAAACCACATTCATCGCGACCGGCCAATTCTGAAAGATAT 4135
|||||||| || |||||| || || ||||| || ||||| ||||| |||
Sbjct 669294 AGAAATTTGTATATTTAAACCAAATACAAGTCGACCTGCAAATTCAGAAAGGTAT 669348
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 276497862091111
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |