Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq220 122 5e-23 seq448 120 2e-22 seq118 120 2e-22 >seq220 Length=889906 Score = 122 bits (134), Expect = 5e-23 Identities = 80/88 (91%), Gaps = 1/88 (1%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| | || ||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 538317 AAAAAATTACAT-GGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 538375 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCGT 11531 ||||| |||||||||||||||||||||| Sbjct 538376 GCTCTAACCAACTGAGCTAATGGGCCGT 538403 Score = 114 bits (126), Expect = 7e-21 Identities = 79/89 (89%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||| ||| | |||||||||| |||||||||| ||||||||||||||||||||| Sbjct 533843 AATAAACAATACA--TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 533786 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 533785 GACGCTCTAACCAACTGAGCTAATGGGCC 533757 >seq448 Length=393124 Score = 120 bits (132), Expect = 2e-22 Identities = 84/95 (88%), Gaps = 1/95 (1%) Strand=Plus/Minus Query 11435 AGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT 11494 ||||| || |||||| | ||||||||||| |||||||||| ||||||||||||||| Sbjct 173037 AGAATAAAATAAAAATTAC-TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTAT 172979 Query 11495 TAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||| |||||||||||||||||||| Sbjct 172978 TAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 172944 >seq118 Length=1428529 Score = 120 bits (132), Expect = 2e-22 Identities = 80/89 (90%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || ||||||| | ||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 1200231 AAAAAAAAAT--ACTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 1200174 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 1200173 GACGCTCTAACCAACTGAGCTAATGGGCC 1200145 Score = 120 bits (132), Expect = 2e-22 Identities = 80/89 (90%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || ||||||| | ||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 1202257 AAAAAAAAAT--AGTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 1202200 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 1202199 GACGCTCTAACCAACTGAGCTAATGGGCC 1202171 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261438497837812