Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq3500 132 5e-26 >seq3500 Length=8023 Score = 132 bits (146), Expect = 5e-26 Identities = 211/298 (71%), Gaps = 6/298 (2%) Strand=Plus/Minus Query 6926 CCATGTGTTAAATGACCACCGCAATCCAAAGACATCGCCAATACTGAATCGCCTGGACTC 6985 ||||| |||| || ||||||||| | || | | | || | |||||| ||| | Sbjct 5363 CCATGAGTTAGGTGTCCACCGCAACTTAGCGATAATCCAAGTATCGTATCGCCCGGAGTA 5304 Query 6986 AGCAACGCATGGTAAACA--GCTTGGTTTGCCTGTGAACCGGAATGGGGTTGAACGTTTG 7043 ||||| | | | ||||| ||||| |||||||| ||||| |||| ||||||||||||| Sbjct 5303 AGCAATGAA--GCAAACACTGCTTGATTTGCCTGAGAACCAGAATAAGGTTGAACGTTTG 5246 Query 7044 CGAAATTGCAACTAAACAGTTCTTTAG-CACGCTCAATTGCCAGGTTCTCGATCTCATCG 7102 | || || || |||||||| | || | ||| || || || | |||| |||||| Sbjct 5245 CAAATTTAACACCAAACAGTT-TACAGAGCCTCTCTATAGCTAGACTTTCGACCTCATCC 5187 Query 7103 GCTTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATACTTGTTGGTA 7162 | | | ||||||| | |||||||| ||| |||||||| || || ||||| || || || Sbjct 5186 ACATATTCACAACCACAGTAATACCTTTTCCCTGGATAACCTTCCGCATATTTATTAGTC 5127 Query 7163 AAAATAGAACCTTGCGCTTTCATAACATCATCGGACACATAGTTTTCGGATGCAATCA 7220 | || ||| ||||| || | ||| || | | ||| | ||||| |||||||||| Sbjct 5126 AGAAAAGAGCCTTGTGCCTCCATCACTGCTTTACTTACAAAATTTTCTGATGCAATCA 5069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553239214893960