Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq57 122 8e-23 seq152 107 2e-18 seq252 84.2 2e-11 >seq57 Length=2082711 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || ||||| ||||| |||||| |||| ||| | ||| ||||| | Sbjct 1619067 ATGCAGATATTCGTGAAAACTTTAACAGGAAAAACGATTACCTTAGAAGTAGAACCTTCT 1619008 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || || | || ||| |||||| || || ||||| || ||||||||||| Sbjct 1619007 GATACAATTGAAAATGTAAAAGCTAAGATTCAAGATAAGGAAGGAATCCCTCCCGATCAG 1618948 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||||| | |||| || || ||||| | ||||||| | ||| | || |||||| Sbjct 1618947 CAAAGGTTGATTTTCGCTGGGAAACAGTTGGAAGATGGTCGAACTCTTTCTGATTATAAC 1618888 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| ||||| || || | ||||| ||||| |||||| ||||||| Sbjct 1618887 ATTCAGAAAGAGTCAACATTGCATCTTGTCCTTAGACTTCGAGGAGG 1618841 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | ||||| || || ||||||||||| | || ||| | ||| | ||| | Sbjct 1619980 AATGCAGATATTTGTTAAGACCTTAACTGGAAAGACCATTACCTTAGAAGTGGAACCGTC 1619921 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| || || | || ||| || ||| || |||||||| || || || ||||| Sbjct 1619920 TGACACGATAGAAAATGTGAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACCAGATCA 1619861 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||| ||| | || | | ||||| || | ||||||| | | | | ||||| || Sbjct 1619860 ACAGAGATTGATCTTTGCAGGCAAGCAGTTGGAAGATGGTCGCACTCTGTCTGACTACAA 1619801 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || || |||||||||||| | ||||| || || || ||||||||||||| Sbjct 1619800 TATCCAGAAAGAATCTACTTTACATCTTGTACTAAGGCTTAGAGGAGGAA 1619751 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | ||||||||||| | ||||||||| | || || | ||| | || | Sbjct 1620892 AATGCAAATTTTTGTAAAAACCCTGACTGGAAAAACTATTACTCTTGAAGTTGAGCCGTC 1620833 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 || || || ||| | || || || || || |||||||| || || ||||| || Sbjct 1620832 AGATACAATAGAGAACGTAAAGGCTAAAATCCAGGATAAAGAAGGAATTCCACCCGACCA 1620773 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||||||| | || | || ||| || || | ||||||| | | | || ||||| Sbjct 1620772 ACAAAGATTAATCTTCGCCGGAAAGCAGTTAGAAGATGGCCGCACTCTTTCAGATTATAA 1620713 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||||| |||||||||||| | ||||| || || ||||| |||||||||| Sbjct 1620712 TATTCAGAAAGAATCTACTCTACATCTTGTACTCAGACTGAGAGGAGGAA 1620663 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | || || || || | || |||||| |||| || | ||| | ||| | Sbjct 1621120 AATGCAGATCTTCGTCAAGACCCTTACAGGAAAAACGATTACACTTGAAGTTGAACCTTC 1621061 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| ||||| | || || || ||| || |||||||| || || || || || Sbjct 1621060 TGACACAATCGAAAATGTTAAGGCTAAAATTCAAGATAAAGAAGGAATTCCGCCAGACCA 1621001 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||||||| | || | || ||| || || | ||||||| | | | || ||||| Sbjct 1621000 ACAAAGATTAATCTTCGCCGGAAAGCAGTTAGAAGATGGCCGCACTCTTTCAGATTATAA 1620941 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||||| |||||||||||| | ||||| || || ||||| |||||||||| Sbjct 1620940 TATTCAGAAAGAATCTACTCTACATCTTGTACTCAGACTAAGAGGAGGAA 1620891 >seq152 Length=1173123 Score = 107 bits (118), Expect = 2e-18 Identities = 150/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 71657 TTCGAGCATAATCAAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAAT 71716 || ||| | | || ||||||||| || || |||||| | || || ||||| || Sbjct 624802 TTGGAGGAAAGTCGAACGCATGACGATCTGTGGAATTCGGCGCAAATCCAGCTGGTGAAG 624743 Query 71717 GAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACT 71776 || || ||||| || |||| |||| ||||||||||| || ||||| || |||||||| Sbjct 624742 GAAGGGAAAATGCATGGATTTTTACGGATGTACTGGGCGAAGAAGATACTTGAGTGGACG 624683 Query 71777 CAAACTCCCGAGCAGGCGCTCGAGTATT-CTATTTATCTAAACGATAGATACAGTCTCGA 71835 | ||| ||| | |||||| || ||| || | ||||||||||||||||| | || Sbjct 624682 TCCAGTCCGGAGGAAGCGCTC-AGAATTGCTTTGTATCTAAACGATAGATATTCCTTGGA 624624 Query 71836 CGGTCGCGATCCTAACGGTTATGTCGGT 71863 ||| | |||||||| || | ||| ||| Sbjct 624623 CGGAAGAGATCCTAATGGATTTGTGGGT 624596 >seq252 Length=802098 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 26870 AGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG 26929 ||| |||||||| ||||| || ||| | |||| | ||| || || | |||||| | || Sbjct 443791 AGGAATACCTCCTGATCAGCAGAGATTAATTTTTGCCGGTAAGCAGTTGGAAGATAACAG 443850 Query 26930 AAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAG 26989 || | || |||||||| ||||||||||||||| | || |||| || ||||| || Sbjct 443851 AACTCTTTCTGATTATAACATACAAAAAGAATCTACTTTACACTTGGTGCTCAGACTAAG 443910 Query 26990 AGGAGG 26995 |||||| Sbjct 443911 AGGAGG 443916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478563454498640