Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq33 102 2e-16 seq334 84.2 6e-11 seq126 84.2 6e-11 >seq33 Length=2490231 Score = 102 bits (112), Expect = 2e-16 Identities = 79/94 (84%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 22858 AATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAA 22917 ||||||||||| | ||||||| ||| ||||| |||||||| || |||||||| ||||| Sbjct 184123 AATCCATTTGACTTCATGGAACATATATCACTGGAAGGAAAAACAAATTTCTTTGAAAAG 184182 Query 22918 AGAGTTGGTGAATACCAAAAAGCAGGTGTTATGG 22951 | |||||| ||||| || ||||||||||| |||| Sbjct 184183 AAAGTTGGAGAATATCAGAAAGCAGGTGTAATGG 184216 >seq334 Length=600474 Score = 84.2 bits (92), Expect = 6e-11 Identities = 129/184 (70%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 78543 TCATTGCAAAATAAAGATACATCAGTGAATGAACAAAATAATTCATAGTTGCGAACCAGA 78602 ||| |||| | || |||||| | |||||| ||| |||||||||| | |||||| Sbjct 107626 TCAGTGCATAGTATGTATACATAATTGAATGGACACAATAATTCATTACTATGAACCATC 107685 Query 78603 TACCACTACCAATGCAAACGGAATATGCATGCCAACAATAAAGAAGAACCGTTAGATGAT 78662 || | | | | ||| ||||| | ||| | || |||||||| || | ||||| Sbjct 107686 TAGCTGATGCTGTATATTCGGTATATGAAAACCATGAGTACAGAAGAACTGTAATATGAT 107745 Query 78663 GATACCAATGAAGGAAAATTACTGGATTCTTACGAATCAGGAGAAAGAATGTATCTACAA 78722 | ||||||||||| || |||| ||| | ||| | || || | ||||| ||||||| | | Sbjct 107746 GGTACCAATGAAGAAATATTAATGGCTGCTTCCTAAGCACAATAAAGATTGTATCTCCTA 107805 Query 78723 GTTC 78726 |||| Sbjct 107806 GTTC 107809 >seq126 Length=1333976 Score = 84.2 bits (92), Expect = 6e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 364949 TGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAA 365008 || ||||||| |||| |||| || ||| | || ||||||||||||| || ||||||| Sbjct 1329902 TGTAGAACATCAAAGGAATTCCGGATGATTTAAAAGCTATTTACAAAACAGTGTGGGAAA 1329843 Query 365009 TTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCC 365068 |||| | |||| | | | ||||| || ||| | || || |||||| ||| | Sbjct 1329842 TTTCACAGAAAACTATATTAAAAATGGCAGCAGATAGAGGAGCATTTATCGATCAATCAC 1329783 Query 365069 AGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCT 365128 | || || || ||| || || | |||| | | || | || || |||||||||| Sbjct 1329782 AATCCTTAAATGTACATATTGCTGAACCAAATTATGGAAAATTAACTTCTATGCATTTCT 1329723 Query 365129 ACGGGTGGAAA 365139 ||||||||||| Sbjct 1329722 ACGGGTGGAAA 1329712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303077445031934