Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq57 87.8 1e-12
>seq57
Length=2082711
Score = 87.8 bits (96), Expect = 1e-12
Identities = 149/214 (70%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||||| ||||||||| || ||||| ||||| || | || || | ||
Sbjct 1620224 AGAACCAAATGCAACGTGGACTCTTTCTGTATATTGTAATCAGACAGTGTGCGACCATCT 1620283
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
||||| || ||||| ||| | || | || |||||| || || | || ||||| ||
Sbjct 1620284 TCCAACTGCTTGCCTGCAAAGATCAACCTCTGTTGATCTGGTGGAATACCTTCTTTATCT 1620343
Query 16844 GCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901
||||| ||| ||||| | | | || || || || ||| | ||||||||
Sbjct 1620344 TGAATTTTAGCT--TTCACATTTTCAATTGTATCAGATGGTTCTACTTCTAAGGTGATGG 1620401
Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||||||||| | ||||||||| || ||||||||
Sbjct 1620402 TTTTTCCGGTTAACGTTTTGACGAATATCTGCAT 1620435
Score = 86.0 bits (94), Expect = 5e-12
Identities = 149/215 (69%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| || | ||| || |||||||||||||| || ||||| || | | ||| | | ||
Sbjct 1620452 AGAACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCT 1620511
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842
||||| || || || ||| ||||||| ||||| || || || | || || || ||
Sbjct 1620512 TCCAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCC 1620571
Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901
|| || ||| || || | | | ||| || ||||||| ||| | || || |
Sbjct 1620572 TGGATTTTGGCT--TTTACATTTTCAATAGTATCAGAGGGCTCCACTTCAAGAGTAATTG 1620629
Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
||||||| ||||| ||||| |||||||| ||||||
Sbjct 1620630 TTTTTCCAGTCAGAGTTTTCACAAAAATTTGCATT 1620664
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405006356665630
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |