Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq57 87.8 1e-12 >seq57 Length=2082711 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| ||||||||| || ||||| ||||| || | || || | || Sbjct 1620224 AGAACCAAATGCAACGTGGACTCTTTCTGTATATTGTAATCAGACAGTGTGCGACCATCT 1620283 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 ||||| || ||||| ||| | || | || |||||| || || | || ||||| || Sbjct 1620284 TCCAACTGCTTGCCTGCAAAGATCAACCTCTGTTGATCTGGTGGAATACCTTCTTTATCT 1620343 Query 16844 GCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 ||||| ||| ||||| | | | || || || || ||| | |||||||| Sbjct 1620344 TGAATTTTAGCT--TTCACATTTTCAATTGTATCAGATGGTTCTACTTCTAAGGTGATGG 1620401 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||||||||| | ||||||||| || |||||||| Sbjct 1620402 TTTTTCCGGTTAACGTTTTGACGAATATCTGCAT 1620435 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| || |||||||||||||| || ||||| || | | ||| | | || Sbjct 1620452 AGAACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCT 1620511 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 ||||| || || || ||| ||||||| ||||| || || || | || || || || Sbjct 1620512 TCCAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCC 1620571 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || ||| || || | | | ||| || ||||||| ||| | || || | Sbjct 1620572 TGGATTTTGGCT--TTTACATTTTCAATAGTATCAGAGGGCTCCACTTCAAGAGTAATTG 1620629 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 ||||||| ||||| ||||| |||||||| |||||| Sbjct 1620630 TTTTTCCAGTCAGAGTTTTCACAAAAATTTGCATT 1620664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405006356665630