Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq33 161 1e-34 seq156 132 5e-26 seq1554 129 7e-25 seq50 129 7e-25 >seq33 Length=2490231 Score = 161 bits (178), Expect = 1e-34 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 93114 CTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCT 93173 |||| |||| || ||||| ||||||||||| || | ||||| | | ||||| ||||| Sbjct 182650 CTTCATCTCTAGAAATCAATTCATTGCTGAAAGTAAGCCCTGGCATTAATCCTCTTTTCT 182591 Query 93174 TGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATG 93233 | | ||||||||| | ||||| |||||||| ||||||| |||||||| || ||||| | Sbjct 182590 TTAACCAAAATATAGCCGCAAAGCTACCAGAGAAAAATACGCCTTCCACAGCAGCAAAAG 182531 Query 93234 CCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGG 93293 | | ||| | ||| |||||| | || | ||| | |||||||| |||||||| || | Sbjct 182530 CAATAATTCTTTCTGCAAAAGTGGCAGTCTTAGAGGAGATCCATTCCAAAGCCCAGTCAG 182471 Query 93294 CTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATC 93342 |||||||||| | |||| || || || || || ||||| || ||||| Sbjct 182470 CTTTTTTCTTCACACAATCCAGAGTCTCAATTGCATTAAAGAGATAATC 182422 Score = 158 bits (174), Expect = 1e-33 Identities = 165/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 93353 GAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATT 93412 ||||| || || || ||||| || | | | ||||| ||||| || ||||| |||||| Sbjct 181696 GAATCCCGAATATAAGTATCTATGAGTAAACTGTACATCTCAGAGTGAACATTTTCCATT 181637 Query 93413 GCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTC 93472 ||||||||||| ||||| |||||||| ||||| || | || ||||||||| ||| ||| Sbjct 181636 GCAATTTGGAAACCGTAAAAACATCTTGCTTCAGTTACTTGAACTTCTTGACTAAACCTC 181577 Query 93473 TCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTT 93532 || || | |||||||| || || ||||| || || ||||| |||||||||| ||| Sbjct 181576 TCAACTAAGTTTTCATTAACAATTCCATCAGAGGCAGCAAAGAAAGCCAATACATGAGAA 181517 Query 93533 ATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAAT 93569 ||||||||||| || ||| ||| | | || ||||| Sbjct 181516 ATAAAATGTTTTTCTTCAGGTTTCAACCTAGTCCAAT 181480 Score = 123 bits (136), Expect = 3e-23 Identities = 112/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 93581 TTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCC 93640 ||||||||||| |||||||| || |||||||| || |||||||||||||||||||| | | Sbjct 181293 TTTGAAAGATCAACTTCTTCAACCGTCCAAAAAGACGCTTCTGCTTTTTTGTACATTTGC 181234 Query 93641 CATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAAC 93700 ||||| || || |||| |||||||||||| ||||| | || ||||| || |||| Sbjct 181233 CATATATCATGGTATTCAATTGGAAATATCACAAATCTTTTGGGGTTTTCACGAAGTAGA 181174 Query 93701 GGCTCTAGTTGTGGGTCAAAC 93721 || || || || | |||||| Sbjct 181173 GGTTCAAGCTGGGTATCAAAC 181153 >seq156 Length=1155920 Score = 132 bits (146), Expect = 5e-26 Identities = 82/87 (94%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 126263 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGA 126320 |||||||||||||||||| |||||||||||||||||||||| |||||||||| | |||| Sbjct 915324 ACAGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATTGGGA 915265 Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||||||||||||| Sbjct 915264 GCGTGGGTTCGAACCCCACACCTGACA 915238 >seq1554 Length=32274 Score = 129 bits (142), Expect = 7e-25 Identities = 80/85 (94%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| | |||||| Sbjct 11946 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAATTGGGAGC 12005 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||||||||||| Sbjct 12006 GTGGGTTCGAACCCCACACCTGACA 12030 >seq50 Length=2248425 Score = 129 bits (142), Expect = 7e-25 Identities = 80/85 (94%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| | |||||| Sbjct 610910 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGGTTGGGAGC 610969 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||||||||||| Sbjct 610970 GTGGGTTCGAACCCCACACCTGACA 610994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556745689911880