Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq33 161 1e-34
seq156 132 5e-26
seq1554 129 7e-25
seq50 129 7e-25
>seq33
Length=2490231
Score = 161 bits (178), Expect = 1e-34
Identities = 173/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 93114 CTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCT 93173
|||| |||| || ||||| ||||||||||| || | ||||| | | ||||| |||||
Sbjct 182650 CTTCATCTCTAGAAATCAATTCATTGCTGAAAGTAAGCCCTGGCATTAATCCTCTTTTCT 182591
Query 93174 TGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATG 93233
| | ||||||||| | ||||| |||||||| ||||||| |||||||| || ||||| |
Sbjct 182590 TTAACCAAAATATAGCCGCAAAGCTACCAGAGAAAAATACGCCTTCCACAGCAGCAAAAG 182531
Query 93234 CCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGG 93293
| | ||| | ||| |||||| | || | ||| | |||||||| |||||||| || |
Sbjct 182530 CAATAATTCTTTCTGCAAAAGTGGCAGTCTTAGAGGAGATCCATTCCAAAGCCCAGTCAG 182471
Query 93294 CTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATC 93342
|||||||||| | |||| || || || || || ||||| || |||||
Sbjct 182470 CTTTTTTCTTCACACAATCCAGAGTCTCAATTGCATTAAAGAGATAATC 182422
Score = 158 bits (174), Expect = 1e-33
Identities = 165/217 (76%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 93353 GAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATT 93412
||||| || || || ||||| || | | | ||||| ||||| || ||||| ||||||
Sbjct 181696 GAATCCCGAATATAAGTATCTATGAGTAAACTGTACATCTCAGAGTGAACATTTTCCATT 181637
Query 93413 GCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTC 93472
||||||||||| ||||| |||||||| ||||| || | || ||||||||| ||| |||
Sbjct 181636 GCAATTTGGAAACCGTAAAAACATCTTGCTTCAGTTACTTGAACTTCTTGACTAAACCTC 181577
Query 93473 TCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTT 93532
|| || | |||||||| || || ||||| || || ||||| |||||||||| |||
Sbjct 181576 TCAACTAAGTTTTCATTAACAATTCCATCAGAGGCAGCAAAGAAAGCCAATACATGAGAA 181517
Query 93533 ATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAAT 93569
||||||||||| || ||| ||| | | || |||||
Sbjct 181516 ATAAAATGTTTTTCTTCAGGTTTCAACCTAGTCCAAT 181480
Score = 123 bits (136), Expect = 3e-23
Identities = 112/141 (79%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 93581 TTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCC 93640
||||||||||| |||||||| || |||||||| || |||||||||||||||||||| | |
Sbjct 181293 TTTGAAAGATCAACTTCTTCAACCGTCCAAAAAGACGCTTCTGCTTTTTTGTACATTTGC 181234
Query 93641 CATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAAC 93700
||||| || || |||| |||||||||||| ||||| | || ||||| || ||||
Sbjct 181233 CATATATCATGGTATTCAATTGGAAATATCACAAATCTTTTGGGGTTTTCACGAAGTAGA 181174
Query 93701 GGCTCTAGTTGTGGGTCAAAC 93721
|| || || || | ||||||
Sbjct 181173 GGTTCAAGCTGGGTATCAAAC 181153
>seq156
Length=1155920
Score = 132 bits (146), Expect = 5e-26
Identities = 82/87 (94%), Gaps = 2/87 (2%)
Strand=Plus/Minus
Query 126263 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGA 126320
|||||||||||||||||| |||||||||||||||||||||| |||||||||| | ||||
Sbjct 915324 ACAGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATTGGGA 915265
Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347
|||||||||||||||||||||||||||
Sbjct 915264 GCGTGGGTTCGAACCCCACACCTGACA 915238
>seq1554
Length=32274
Score = 129 bits (142), Expect = 7e-25
Identities = 80/85 (94%), Gaps = 2/85 (2%)
Strand=Plus/Plus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
|||||||||||||||| |||||||||||||||||||||| |||||||||| | ||||||
Sbjct 11946 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAATTGGGAGC 12005
Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347
|||||||||||||||||||||||||
Sbjct 12006 GTGGGTTCGAACCCCACACCTGACA 12030
>seq50
Length=2248425
Score = 129 bits (142), Expect = 7e-25
Identities = 80/85 (94%), Gaps = 2/85 (2%)
Strand=Plus/Plus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
|||||||||||||||| |||||||||||||||||||||| |||||||||| | ||||||
Sbjct 610910 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGGTTGGGAGC 610969
Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347
|||||||||||||||||||||||||
Sbjct 610970 GTGGGTTCGAACCCCACACCTGACA 610994
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556745689911880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |