Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq57 158 1e-33 seq504 131 1e-25 >seq57 Length=2082711 Score = 158 bits (174), Expect = 1e-33 Identities = 161/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| |||||| | || || ||||| | |||||||||||||| || | Sbjct 1620663 ATGCAAATTTTTGTGAAAACTCTGACTGGAAAAACAATTACTCTTGAAGTGGAGCCCTCT 1620604 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||| || || ||||| || || ||||| ||||| Sbjct 1620603 GATACTATTGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGGAATCCCACCAGATCAG 1620544 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| ||||| || || ||||| || ||| ||| || | || |||||||| Sbjct 1620543 CAGCGTCTTATTTTTGCTGGAAAGCAGTTGGAAGATGGCCGAACTCTATCTGATTACAAT 1620484 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 |||||||| || |||||| | ||||||||| Sbjct 1620483 ATTCAAAAGGAGTCCACCCTTCATTTAGTT 1620454 Score = 149 bits (164), Expect = 5e-31 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || |||||| | || || ||||| | ||||||||||| || || | Sbjct 1619295 ATGCAAATTTTCGTGAAAACTCTGACTGGAAAAACAATTACTCTTGAAGTTGAGCCCTCT 1619236 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||| || || ||||| || || ||||| ||||| Sbjct 1619235 GATACTATTGAAAATGTTAAAGCCAAAATCCAGGATAAGGAAGGAATCCCACCAGATCAG 1619176 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| ||||| || || ||||| || ||| ||| || | || |||||||| Sbjct 1619175 CAGCGTCTTATTTTTGCTGGAAAGCAGTTGGAAGATGGCCGAACTCTATCTGATTACAAT 1619116 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 |||||||| || |||||| | ||||||||| Sbjct 1619115 ATTCAAAAGGAGTCCACCCTTCATTTAGTT 1619086 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| |||||||| || || ||||| | ||||||||||| ||| | | Sbjct 1618839 ATGCAAATATTTGTGAAAACTTTGACTGGAAAAACCATTACTCTTGAAGTTGAACCATCT 1618780 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| ||||||||||||||||| || || ||||| || || Sbjct 1618779 GACACTATTGAAAATGTGAAAGCGAAAATTCAAGACAAGGAAGGAATACCACCTGACCAG 1618720 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || || || || ||||| || || ||| |||||| | || ||||| || Sbjct 1618719 CAAAGGTTGATTTTCGCAGGGAAACAATTGGAAGATGGTCGCACCTTGTCAGATTATAAT 1618660 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| || ||||| || ||||| |||| || ||||||| || || Sbjct 1618659 ATTCAGAAGGAATCAACTTTACATCTAGTACTGAGATTGCGTGGCGG 1618613 Score = 140 bits (154), Expect = 3e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| |||||| | || || ||||| | ||||||||||| || | | Sbjct 1619751 ATGCAAATTTTTGTGAAAACTCTGACTGGAAAAACTATTACTCTTGAAGTTGAGCCGTCT 1619692 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || | | || ||||| || || || || || |||||||| ||||| Sbjct 1619691 GATACAATAGAGAACGTAAAGGCTAAAATCCAGGATAAAGAAGGAATTCCACCAGATCAG 1619632 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| ||||| || || |||||||| ||| ||| || | || |||||||| Sbjct 1619631 CAGCGTCTTATTTTTGCTGGAAAGCAGTTAGAAGATGGCCGAACTCTATCTGATTACAAT 1619572 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 |||||||| || |||||| | ||||| ||| Sbjct 1619571 ATTCAAAAGGAGTCCACCCTTCATTTGGTT 1619542 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || ||||| |||||||| ||||| |||| | ||||| ||| | | Sbjct 1620435 ATGCAGATATTCGTCAAAACGTTAACCGGAAAAACCATCACCTTAGAAGTAGAACCATCT 1620376 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||||||||| || || ||||||||||| |||||| Sbjct 1620375 GATACAATTGAAAATGTGAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACCAGATCAA 1620316 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| ||||| ||||| || ||| ||||| | || |||||||| Sbjct 1620315 CAGAGGTTGATCTTTGCAGGCAAGCAGTTGGAAGATGGTCGCACACTGTCTGATTACAAT 1620256 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 || || ||||| ||||| | ||||| ||| Sbjct 1620255 ATACAGAAAGAGTCCACGTTGCATTTGGTT 1620226 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| ||||| | || || ||||| | ||||||||||| || | | Sbjct 1620891 ATGCAAATTTTTGTAAAAACCCTGACTGGAAAAACTATTACTCTTGAAGTTGAGCCGTCA 1620832 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || | | || ||||| || || || || || ||||||||||| ||| Sbjct 1620831 GATACAATAGAGAACGTAAAGGCTAAAATCCAGGATAAAGAAGGAATTCCACCCGACCAA 1620772 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || || ||||| || |||||||| ||| |||||| | || ||||| || Sbjct 1620771 CAAAGATTAATCTTCGCCGGAAAGCAGTTAGAAGATGGCCGCACTCTTTCAGATTATAAT 1620712 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| |||||||| || ||||| | || | || || | ||||| Sbjct 1620711 ATTCAGAAAGAATCTACTCTACATCTTGTACTCAGACTGAGAGGAGG 1620665 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || |||||||| || ||||| || || || | || | ||||||||| | | Sbjct 1619979 ATGCAGATATTTGTTAAGACCTTAACTGGAAAGACCATTACCTTAGAAGTGGAACCGTCT 1619920 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| ||||||||||| || || ||||||||||| |||||| Sbjct 1619919 GACACGATAGAAAATGTGAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACCAGATCAA 1619860 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| ||||| ||||| || ||| ||||| | || || ||||| Sbjct 1619859 CAGAGATTGATCTTTGCAGGCAAGCAGTTGGAAGATGGTCGCACTCTGTCTGACTACAAT 1619800 Query 22399 ATTCAAAAAGAATCCACCATACAT 22422 || || |||||||| || ||||| Sbjct 1619799 ATCCAGAAAGAATCTACTTTACAT 1619776 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || ||||| ||| | || || || || | ||||||||||| ||| | | Sbjct 1620207 ATGCAGATCTTCGTTAAGACTCTTACAGGAAAGACTATTACTCTTGAAGTAGAACCTTCT 1620148 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| || |||||||| ||||| || || ||||| || || Sbjct 1620147 GACACAATTGAAAATGTAAAAGCGAAGATTCAAGATAAGGAAGGAATACCACCTGACCAG 1620088 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || || || || ||||||||||| ||| |||||| | || |||||||| Sbjct 1620087 CAAAGGTTGATTTTCGCTGGGAAACAGTTAGAAGATGGGCGCACCCTTTCTGATTACAAT 1620028 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| |||||||| || | ||| | || || || || | ||||| Sbjct 1620027 ATTCAGAAAGAATCAACTCTTCATCTTGTCTTAAGACTGAGAGGAGG 1619981 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || ||||||||||| || |||||| | || | ||||| ||| | | Sbjct 1619067 ATGCAGATATTCGTGAAAACTTTAACAGGAAAAACGATTACCTTAGAAGTAGAACCTTCT 1619008 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| || |||||||| ||||| || || || |||||||| Sbjct 1619007 GATACAATTGAAAATGTAAAAGCTAAGATTCAAGATAAGGAAGGAATCCCTCCCGATCAG 1618948 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || || || || |||||||| || ||| || || | || ||||| ||| Sbjct 1618947 CAAAGGTTGATTTTCGCTGGGAAACAGTTGGAAGATGGTCGAACTCTTTCTGATTATAAC 1618888 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| ||||| || || | ||| | || | || | || |||||| Sbjct 1618887 ATTCAGAAAGAGTCAACATTGCATCTTGTCCTTAGACTTCGAGGAGGT 1618840 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || ||| | || || || || | || |||||||| ||| | | Sbjct 1619523 ATGCAGATCTTTGTGAAGACTCTTACAGGAAAGACCATTACACTTGAAGTTGAACCATCT 1619464 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || ||||||||||| || || || |||||||| || ||| Sbjct 1619463 GACACTATCGAAAATGTTAAGGCCAAAATTCAAGATAAAGAAGGAATTCCACCAGACCAA 1619404 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || || ||||| || ||| |||| ||| |||||| |||| ||||| || Sbjct 1619403 CAAAGGTTAATCTTCGCCGGAAAGCAGCTAGAAGATGGCCGCACTCTCTCAGATTATAAT 1619344 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || |||||||| || ||||| | || | || || | ||||| Sbjct 1619343 ATCCAGAAAGAATCAACTCTACATCTTGTACTCAGACTGAGAGGAGG 1619297 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || |||||| | || |||||||| ||| | | Sbjct 1621119 ATGCAGATCTTCGTCAAGACCCTTACAGGAAAAACGATTACACTTGAAGTTGAACCTTCT 1621060 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || ||||||||||| || || || ||||| || || ||| Sbjct 1621059 GACACAATCGAAAATGTTAAGGCTAAAATTCAAGATAAAGAAGGAATTCCGCCAGACCAA 1621000 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || || ||||| || |||||||| ||| |||||| | || ||||| || Sbjct 1620999 CAAAGATTAATCTTCGCCGGAAAGCAGTTAGAAGATGGCCGCACTCTTTCAGATTATAAT 1620940 Query 22399 ATTCAAAAAGAATCCACCATACAT 22422 ||||| |||||||| || ||||| Sbjct 1620939 ATTCAGAAAGAATCTACTCTACAT 1620916 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || || || ||||| || || || || || | ||||||||||| || | Sbjct 1621350 AAAATGCAGATCTTCGTAAAAACGTTGACGGGGAAGACAATAACTCTTGAAGTTGAGCCT 1621291 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || | | || ||||||||||| ||||| || || || || ||| Sbjct 1621290 TCAGATACTATTGAAAACGTAAAGGCTAAAATTCAAGATAAGGAAGGAATCCCTCCTGAT 1621231 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||||| | || ||||| || || ||||| || ||| || ||| | ||||||||| Sbjct 1621230 CAGCAACGATTAATTTTTGCTGGAAAGCAGTTGGAAGATGGTCGTACCCTATCCGATTAC 1621171 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGA 22434 || || || || || ||||| | ||||| ||| | ||| Sbjct 1621170 AATATACAGAAGGAGTCCACGTTGCATTTGGTTCTTCGA 1621132 >seq504 Length=327254 Score = 131 bits (144), Expect = 1e-25 Identities = 155/209 (74%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 22201 TTTTATACATTTGTAAAG-ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCAC 22259 |||| || || | |||| |||||||||||||| |||||||| || |||||||| | || Sbjct 214312 TTTTTTAGATCTTTAAAATATGCAAATTTTTGTGAAAACTTTGACGGGTAAAACAATTAC 214253 Query 22260 TCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGA 22319 ||||| || ||| || | || || | || || | || ||| || ||||| || || Sbjct 214252 CCTTGAGGTTGAACCCTCAGACACAATTGAAAATGTTAAGGCAAAGATCCAAGATAAAGA 214193 Query 22320 GGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCG 22379 || ||||| || ||||| ||| | | || ||||| ||||||||| |||| ||| || Sbjct 214192 AGGAATTCCTCCAGATCAGCAAAGATTGATTTTTGCTGGCAAACAGCTAGAAGATGGACG 214133 Query 22380 CACCGTCTCCGATTACAACATTCAAAAAG 22408 |||| | ||||||||||| || || |||| Sbjct 214132 CACCCTTTCCGATTACAATATCCAGAAAG 214104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419643406051405