Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq57 181 2e-40 seq504 122 2e-22 seq1 95.1 2e-14 >seq57 Length=2082711 Score = 181 bits (200), Expect = 2e-40 Identities = 178/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| | || | | ||| | ||||| || || ||||| || || |||||||| | Sbjct 1620891 TTCCTCCTCTTAGTCTGAGTACAAGATGTAGAGTAGATTCTTTCTGAATATTATAATCTG 1620950 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || | ||||||||||||||||| |||||||| || | |||||||||||| || | Sbjct 1620951 AAAGAGTGCGGCCATCTTCTAACTGCTTTCCGGCGAAGATTAATCTTTGTTGGTCTGGCG 1621010 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 |||| ||||| || |||||||| || ||||| || ||||| ||||| | | ||| | Sbjct 1621011 GAATTCCTTCTTTATCTTGAATTTTAGCCTTAACATTTTCGATTGTGTCAGAAGGTTCAA 1621070 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 |||| | || || |||||||| || |||||||||||||| ||||||||| Sbjct 1621071 CTTCAAGTGTAATCGTTTTTCCTGTAAGGGTCTTGACGAAGATCTGCATT 1621120 Score = 174 bits (192), Expect = 3e-38 Identities = 176/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| | || | | ||| | ||||| || || ||||| ||||| |||||||| | Sbjct 1619295 TTCCTCCTCTCAGTCTGAGTACAAGATGTAGAGTTGATTCTTTCTGGATATTATAATCTG 1619354 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 |||| || | |||||||||| |||||| |||||||| || | ||||||||||| |||| Sbjct 1619355 AGAGAGTGCGGCCATCTTCTAGCTGCTTTCCGGCGAAGATTAACCTTTGTTGGTCTGGTG 1619414 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 |||| ||||| || |||||||| || ||||| || ||||| ||||| | || ||| | Sbjct 1619415 GAATTCCTTCTTTATCTTGAATTTTGGCCTTAACATTTTCGATAGTGTCAGATGGTTCAA 1619474 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| | || ||||| ||||| || || ||||| || || |||||||| Sbjct 1619475 CTTCAAGTGTAATGGTCTTTCCTGTAAGAGTCTTCACAAAGATCTGCAT 1619523 Score = 170 bits (188), Expect = 4e-37 Identities = 163/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||| || | |||||||||||| || || || ||||| || ||||| | |||||||| Sbjct 1620227 ACCAAATGCAACGTGGACTCTTTCTGTATATTGTAATCAGACAGTGTGCGACCATCTTCC 1620286 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 |||||||| || || || || | || ||||| || |||||||| ||||| || |||||| Sbjct 1620287 AACTGCTTGCCTGCAAAGATCAACCTCTGTTGATCTGGTGGAATACCTTCTTTATCTTGA 1620346 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || || || || || || || || | || ||||||||| ||||||||||||||| Sbjct 1620347 ATTTTAGCTTTCACATTTTCAATTGTATCAGATGGTTCTACTTCTAAGGTGATGGTTTTT 1620406 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || | || ||||||||||||||||| Sbjct 1620407 CCGGTTAACGTTTTGACGAATATCTGCAT 1620435 Score = 163 bits (180), Expect = 5e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| | || | | ||| | ||||| || || ||||| || || |||||||| | Sbjct 1620663 TTCCTCCTCTCAGTCTGAGTACAAGATGTAGAGTAGATTCTTTCTGAATATTATAATCTG 1620722 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || | ||||||||||||||||| |||||||| || | ||||||||||||||||| Sbjct 1620723 AAAGAGTGCGGCCATCTTCTAACTGCTTTCCGGCGAAGATTAATCTTTGTTGGTCGGGTG 1620782 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 |||| ||||| || || || || || ||||| ||| ||| || || |||| | || | Sbjct 1620783 GAATTCCTTCTTTATCCTGGATTTTAGCCTTTACGTTCTCTATTGTATCTGACGGCTCAA 1620842 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 |||| | || || |||||||| || ||||| || || || || |||||| Sbjct 1620843 CTTCAAGAGTAATAGTTTTTCCAGTCAGGGTTTTTACAAAAATTTGCATT 1620892 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| | || | || || | || || || || ||||| || || || ||||| | Sbjct 1619979 TTCCTCCTCTCAGTCTTAAGACAAGATGAAGAGTTGATTCTTTCTGAATATTGTAATCAG 1620038 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || | ||||||||||||||| ||||| ||||| || | ||||| ||||| |||| Sbjct 1620039 AAAGGGTGCGCCCATCTTCTAACTGTTTCCCAGCGAAAATCAACCTTTGCTGGTCAGGTG 1620098 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | || |||||||| ||||||||||| || || || || || ||||| | | ||||| Sbjct 1620099 GTATTCCTTCCTTATCTTGAATCTTCGCTTTTACATTTTCAATTGTGTCAGAAGGTTCTA 1620158 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 |||| | || || || ||||| || || ||||| ||||| ||||||||| Sbjct 1620159 CTTCAAGAGTAATAGTCTTTCCTGTAAGAGTCTTAACGAAGATCTGCATT 1620208 Score = 152 bits (168), Expect = 9e-32 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324 || |||||||| || ||||||||||| || || || | |||||||| ||||| ||||| Sbjct 1618871 GTTGACTCTTTCTGAATGTTATAATCAGAAAGAGTTCGACCATCTTCCAACTGTTTCCCA 1618930 Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384 ||||| || | ||||| || ||||| || || |||||||| ||||||||||| || || Sbjct 1618931 GCGAAAATCAACCTTTGCTGATCGGGAGGGATTCCTTCCTTATCTTGAATCTTAGCTTTT 1618990 Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444 || || || || || | | ||||||||| ||||| || |||||||| || | || Sbjct 1618991 ACATTTTCAATTGTATCAGAAGGTTCTACTTCTAAGGTAATCGTTTTTCCTGTTAAAGTT 1619050 Query 68445 TTGACGAATATCTGCAT 68461 || |||||||||||||| Sbjct 1619051 TTCACGAATATCTGCAT 1619067 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| | ||| | | ||| | |||| || || ||||| ||||| || || || | Sbjct 1619751 TTCCTCCTCTAAGCCTTAGTACAAGATGTAAAGTAGATTCTTTCTGGATATTGTAGTCAG 1619810 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || | |||||||| |||||||| || || || || | ||| ||||| || |||| Sbjct 1619811 ACAGAGTGCGACCATCTTCCAACTGCTTGCCTGCAAAGATCAATCTCTGTTGATCTGGTG 1619870 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 |||| ||||| || |||||||| || || || || || || ||||| | | ||| | Sbjct 1619871 GAATACCTTCTTTATCTTGAATTTTAGCTTTCACATTTTCTATCGTGTCAGACGGTTCCA 1619930 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 |||| ||||| ||||| ||||| || | |||||| || |||||||||||| Sbjct 1619931 CTTCTAAGGTAATGGTCTTTCCAGTTAAGGTCTTAACAAATATCTGCATT 1619980 Score = 136 bits (150), Expect = 7e-27 Identities = 171/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 |||| ||||| || || | | || ||| | |||| || || || || || || |||| Sbjct 1618605 TTTAGTTTCCGCCACGCAATCTCAGTACTAGATGTAAAGTTGATTCCTTCTGAATATTAT 1618664 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 |||| || | || | |||||||| || || ||||| ||||| || | ||||| |||| Sbjct 1618665 AATCTGACAAGGTGCGACCATCTTCCAATTGTTTCCCTGCGAAAATCAACCTTTGCTGGT 1618724 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 | ||||| || ||||||||||||||||| || || || || || || ||||| | || Sbjct 1618725 CAGGTGGTATTCCTTCCTTGTCTTGAATTTTCGCTTTCACATTTTCAATAGTGTCAGATG 1618784 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| ||||| | || ||||||||||| || | || || || ||||| ||||| Sbjct 1618785 GTTCAACTTCAAGAGTAATGGTTTTTCCAGTCAAAGTTTTCACAAATATTTGCAT 1618839 Score = 127 bits (140), Expect = 4e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||| || || |||||||| ||||| || || ||||| || || || | ||||||||| Sbjct 1619543 ACCAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTCT 1619602 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 |||||||| || || || || || | || || || |||||||| ||||| || || || Sbjct 1619603 AACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGAATTCCTTCTTTATCCTGG 1619662 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || ||||| ||| ||| || || || | | || ||||| | || || |||||| Sbjct 1619663 ATTTTAGCCTTTACGTTCTCTATTGTATCAGACGGCTCAACTTCAAGAGTAATAGTTTTT 1619722 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || || || || || || || |||||| Sbjct 1619723 CCAGTCAGAGTTTTCACAAAAATTTGCATT 1619752 >seq504 Length=327254 Score = 122 bits (134), Expect = 2e-22 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 68272 CTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATA 68331 |||| ||||| || |||||||| || || | |||||||||| ||| || || || || | Sbjct 214104 CTTTCTGGATATTGTAATCGGAAAGGGTGCGTCCATCTTCTAGCTGTTTGCCAGCAAAAA 214163 Query 68332 TGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCT 68391 | | |||||| || || || ||||| ||||| || ||||| ||||||||||| || | Sbjct 214164 TCAATCTTTGCTGATCTGGAGGAATTCCTTCTTTATCTTGGATCTTTGCCTTAACATTTT 214223 Query 68392 CGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 | || ||||||| | ||| || || | ||| || ||||| ||||| | || || || | Sbjct 214224 CAATTGTGTCTGAGGGTTCAACCTCAAGGGTAATTGTTTTACCCGTCAAAGTTTTCACAA 214283 Query 68452 ATATCTGCAT 68461 | || ||||| Sbjct 214284 AAATTTGCAT 214293 >seq1 Length=13425595 Score = 95.1 bits (104), Expect = 2e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 268363 GCGAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAG 268422 |||||| ||||||| || || || | || || ||| |||||| || |||||||| || Sbjct 12886570 GCGAGTAATTTTTCTAGTTACAAAATTTTCACCTCGTCTAGGGCTTTCATGGTTGAAAAG 12886511 Query 268423 GATGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGC 268482 || || ||||| ||||| || || || || || | ||| || || |||||||||||||| Sbjct 12886510 AATTCCATTGCAAGCGAAAATTCCGTAGGCTTCTCTGTAATTAACCACCGTCCAGTATGC 12886451 Query 268483 AAACATCTTTGC 268494 | | | |||||| Sbjct 12886450 ATATAACTTTGC 12886439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921431889129640