Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_009514.1 Length=47021 Score E Sequences producing significant alignments: (Bits) Value seq2192 100 9e-17 >seq2192 Length=16777 Score = 100 bits (110), Expect = 9e-17 Identities = 277/418 (66%), Gaps = 9/418 (2%) Strand=Plus/Minus Query 36631 CCGGTAACGCCAACTCTGTACGTCTCACCACCTCTATGA--TTGGCGTCTTATG-TGGTG 36687 |||||| || ||| |||| | |||||||| ||||| || || || || ||||| Sbjct 16049 CCGGTAGTGCAAACCCTGTTCAGTTCACCACCAATATGAGTTTTGCACCTCTTGGTGGTG 15990 Query 36688 AGTTTTTTAAGCTTGCTACCGAGGCTGCCATTATGGCTACG--ATCCCAACCTTTGTTCA 36745 | | || || ||| |||| | | ||||||| | || | | | |||| | || Sbjct 15989 ATTAAATTCAGATTGTCACCGGAGGT--CATTATGAC-ACTTCAAACAAGCCTTGCTGCA 15933 Query 36746 CCCTGAAATCACGATCATCAATGGTCGTGCTGTCACTACATCTCTTGCAGTTGCTAACTA 36805 ||| || |||| ||| ||||||| ||||| |||||||| | | |||||| | || Sbjct 15932 CCCA-AAGTCACTATCCGCAATGGTAAAGCTGTAACTACATCATTGGACGTTGCTGATTA 15874 Query 36806 CTTTACTAAACGGCATGAGCGGGTTTTAGATAGAATTCGAAACCTTGAATGCTCCGCTGA 36865 |||| || || || || || ||| | ||| | |||||| ||||| | | Sbjct 15873 CTTTGACAAGCGTCACGATAACGTATTACGCACCATTGAACGCCTTGATTGCTCTGAAAA 15814 Query 36866 ATTTGCTGAACACAATTTTGTGTTAAGTGGTTATACCGACGCTTCAGGCCGCAAACTACC 36925 |||| ||| | |||||||| | | |||| || |||||| |||||||||||||||| Sbjct 15813 ATTTACTGCCCTCAATTTTGAGGTGAGTGAATACACCGACAGCACAGGCCGCAAACTACC 15754 Query 36926 TTGCTATCAAATAACCCGCGATGGCTTTGCGTTTCTTGCTATGGGTTTCACGGGTAAACG 36985 ||| |||||| || ||||| ||||| | ||||| ||||| || ||| Sbjct 15753 GATGTATACCATAACCAAGGACGGCTTCATTTTTCTCGTCATGGGCTTCACCGGCAAAAA 15694 Query 36986 TGCTGCCCAGTTCAAAGAGGCATACATCAATGCCTTTAACCAGATGGAGAAACAGCTT 37043 || || |||||| || || ||||| | ||||||| ||||| | |||||| Sbjct 15693 AGCAGCAGCGTTCAAGGAAGCTTACATTGCGGAGTTTAACCGCATGGAAGAGCAGCTT 15636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150316075600902