Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq57 145 2e-29 seq504 96.9 8e-15 >seq57 Length=2082711 Score = 145 bits (160), Expect = 2e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | ||| | ||| || | ||| | |||| ||||| || ||||| || || | Sbjct 1620208 TCCACCTCTGAGACGAAGAACCAAATGCAACGTGGACTCTTTCTGTATATTGTAATCAGA 1620267 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || ||||| || ||||| || || || ||||| ||||||| | ||||||| ||| Sbjct 1620268 CAGTGTGCGACCATCTTCCAACTGCTTGCCTGCAAAGATCAACCTCTGTTGATCTGGTGG 1620327 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || ||||||||||| || ||||| |||||||| ||||| || | ||| | |||||| Sbjct 1620328 AATACCTTCTTTATCTTGAATTTTAGCTTTCACATTTTCAATTGTATCAGATGGTTCTAC 1620387 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| | ||||| || || ||||| | || ||||||||||||||||| Sbjct 1620388 TTCTAAGGTGATGGTTTTTCCGGTTAACGTTTTGACGAATATCTGCAT 1620435 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 || || ||||| ||||| | || |||||| |||||||| ||||| | || ||||| Sbjct 1619762 AGCCTTAGTACAAGATGTAAAGTAGATTCTTTCTGGATATTGTAGTCAGACAGAGTGCGA 1619821 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCT 288375 || ||||| || || || ||||| ||||||| | ||||||| ||| || |||||| Sbjct 1619822 CCATCTTCCAACTGCTTGCCTGCAAAGATCAATCTCTGTTGATCTGGTGGAATACCTTCT 1619881 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTG 288435 ||||| || ||||| |||||||| |||||||| | || || ||| ||||| | || Sbjct 1619882 TTATCTTGAATTTTAGCTTTCACATTTTCTATCGTGTCAGACGGTTCCACTTCTAAGGTA 1619941 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || ||||| || || | ||||| || |||||||||||| Sbjct 1619942 ATGGTCTTTCCAGTTAAGGTCTTAACAAATATCTGCATT 1619980 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 ||||| ||||| ||||| | || |||||| ||||||||||| || | ||| ||||| Sbjct 1619306 AGTCTGAGTACAAGATGTAGAGTTGATTCTTTCTGGATATTATAATCTGAGAGAGTGCGG 1619365 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCT 288375 || ||||||| || ||||| |||||||| | | ||||| ||| ||||||||| Sbjct 1619366 CCATCTTCTAGCTGCTTTCCGGCGAAGATTAACCTTTGTTGGTCTGGTGGAATTCCTTCT 1619425 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTG 288435 ||||| || ||||| || || || ||||| |||| || | ||| ||||| || || Sbjct 1619426 TTATCTTGAATTTTGGCCTTAACATTTTCGATAGTGTCAGATGGTTCAACTTCAAGTGTA 1619485 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || |||||||| || || |||||||| Sbjct 1619486 ATGGTCTTTCCTGTAAGAGTCTTCACAAAGATCTGCAT 1619523 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 ||||| ||||| ||||| | || |||||| || |||||||| || | || ||||| Sbjct 1620674 AGTCTGAGTACAAGATGTAGAGTAGATTCTTTCTGAATATTATAATCTGAAAGAGTGCGG 1620733 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCT 288375 || |||||||| || ||||| |||||||| | | ||||| ||| ||||||||| Sbjct 1620734 CCATCTTCTAACTGCTTTCCGGCGAAGATTAATCTTTGTTGGTCGGGTGGAATTCCTTCT 1620793 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTG 288435 |||||||||||||| || || ||||| ||||| | ||| || || ||||| || || Sbjct 1620794 TTATCCTGGATTTTAGCCTTTACGTTCTCTATTGTATCTGACGGCTCAACTTCAAGAGTA 1620853 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || ||||| || || || || || |||||| Sbjct 1620854 ATAGTTTTTCCAGTCAGGGTTTTTACAAAAATTTGCATT 1620892 Score = 136 bits (150), Expect = 9e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | || | ||| || | ||||| ||| || ||||| ||||| || || | Sbjct 1619069 CCACCTCTAAGACGAAGAACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGAT 1619128 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| || || ||||| || || || |||||||| ||| |||| Sbjct 1619129 AGAGTTCGGCCATCTTCCAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGG 1619188 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| |||||||||||||| ||||| || ||||| |||| ||| | || ||| Sbjct 1619189 ATTCCTTCCTTATCCTGGATTTTGGCTTTAACATTTTCAATAGTATCAGAGGGCTCAACT 1619248 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || || || || |||||||| || ||||| || |||||| Sbjct 1619249 TCAAGAGTAATTGTTTTTCCAGTCAGAGTTTTCACGAAAATTTGCATT 1619296 Score = 136 bits (150), Expect = 9e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || | ||| | ||| || | ||||| ||| || ||||| ||||| || || | Sbjct 1619525 CCCCCTCTGAGCCGAAGAACCAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGAT 1619584 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || |||||||| || ||||| || || || |||||||| ||| ||| Sbjct 1619585 AGAGTTCGGCCATCTTCTAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGA 1619644 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||||||||||||||||||||| || || ||||| ||||| | ||| || || ||| Sbjct 1619645 ATTCCTTCTTTATCCTGGATTTTAGCCTTTACGTTCTCTATTGTATCAGACGGCTCAACT 1619704 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || || || || |||||||| || || || || |||||| Sbjct 1619705 TCAAGAGTAATAGTTTTTCCAGTCAGAGTTTTCACAAAAATTTGCATT 1619752 Score = 136 bits (150), Expect = 9e-27 Identities = 164/222 (74%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 ||||| ||||| ||||| | || |||||| || |||||||| || | || ||||| Sbjct 1620902 AGTCTGAGTACAAGATGTAGAGTAGATTCTTTCTGAATATTATAATCTGAAAGAGTGCGG 1620961 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCT 288372 || |||||||| || ||||| |||||||| | | ||||| ||||| |||||| Sbjct 1620962 CCATCTTCTAACTGCTTTCCGGCGAAGATTAATCTTTGTTGG---TCTGGCGGAATTCCT 1621018 Query 288373 TCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGC 288432 |||||||| || ||||| || || || ||||| || | || | ||| ||||| || Sbjct 1621019 TCTTTATCTTGAATTTTAGCCTTAACATTTTCGATTGTGTCAGAAGGTTCAACTTCAAGT 1621078 Query 288433 GTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || ||||| || || || || ||||||||||| ||||||||| Sbjct 1621079 GTAATCGTTTTTCCTGTAAGGGTCTTGACGAAGATCTGCATT 1621120 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | || | ||| || | ||||| ||| || ||||| ||||| || || | Sbjct 1620437 CCACCTCTAAGACGAAGAACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGAT 1620496 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| || || ||||| || || || |||||||| ||| |||| Sbjct 1620497 AGAGTTCGGCCATCTTCCAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGG 1620556 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| |||||||||||||| ||||| || ||||| |||| ||| | || ||| Sbjct 1620557 ATTCCTTCCTTATCCTGGATTTTGGCTTTTACATTTTCAATAGTATCAGAGGGCTCCACT 1620616 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || || || || |||||||| || || || || |||||| Sbjct 1620617 TCAAGAGTAATTGTTTTTCCAGTCAGAGTTTTCACAAAAATTTGCATT 1620664 Score = 129 bits (142), Expect = 1e-24 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | ||||| ||| || | ||| | |||| || || || ||||| || |||| Sbjct 1621120 TCCACCTCTGAGTCGAAGAACCAAATGCAACGTGGACTCCTTCTGTATATTGTAATCGGA 1621179 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || || || ||||| || || ||||| || || || | || || ||| | || Sbjct 1621180 TAGGGTACGACCATCTTCCAACTGCTTTCCAGCAAAAATTAATCGTTGCTGATCAGGAGG 1621239 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||||||||| ||||| || ||||| || || |||||||| |||| ||| | || || Sbjct 1621240 GATTCCTTCCTTATCTTGAATTTTAGCCTTTACGTTTTCAATAGTATCTGAAGGCTCAAC 1621299 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| || || || |||||||| |||| || || ||||| ||||||||| Sbjct 1621300 TTCAAGAGTTATTGTCTTCCCCGTCAACGTTTTTACGAAGATCTGCATT 1621348 Score = 127 bits (140), Expect = 5e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || | ||| ||||| ||||| | || ||| || || |||||||| || | Sbjct 1618612 TCCGCCACGCAATCTCAGTACTAGATGTAAAGTTGATTCCTTCTGAATATTATAATCTGA 1618671 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | ||||| || ||||| |||||||| |||||||| |||| | || || | ||| Sbjct 1618672 CAAGGTGCGACCATCTTCCAATTGTTTCCCTGCGAAAATCAACCTTTGCTGGTCAGGTGG 1618731 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 |||||||| || || || |||||||||||||| ||||| |||| || | ||| || Sbjct 1618732 TATTCCTTCCTTGTCTTGAATTTTCGCTTTCACATTTTCAATAGTGTCAGATGGTTCAAC 1618791 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || || || || || || |||| ||| || || ||||| ||||| Sbjct 1618792 TTCAAGAGTAATGGTTTTTCCAGTCAAAGTTTTCACAAATATTTGCAT 1618839 Score = 116 bits (128), Expect = 9e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || |||||||| || ||||| | || ||||| || || ||||| || | Sbjct 1618841 CCTCCTCGAAGTCTAAGGACAAGATGCAATGTTGACTCTTTCTGAATGTTATAATCAGAA 1618900 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| || ||||| || ||||| |||| | || ||| ||| Sbjct 1618901 AGAGTTCGACCATCTTCCAACTGTTTCCCAGCGAAAATCAACCTTTGCTGATCGGGAGGG 1618960 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||| || || || ||||| || ||||| || | ||| | ||||||| Sbjct 1618961 ATTCCTTCCTTATCTTGAATCTTAGCTTTTACATTTTCAATTGTATCAGAAGGTTCTACT 1619020 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | || ||||| || || || | ||| || |||||||||||||| Sbjct 1619021 TCTAAGGTAATCGTTTTTCCTGTTAAAGTTTTCACGAATATCTGCAT 1619067 >seq504 Length=327254 Score = 96.9 bits (106), Expect = 8e-15 Identities = 138/193 (72%), Gaps = 6/193 (3%) Strand=Plus/Plus Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343 |||| |||||||| || |||| || |||||||| ||||||| ||||| || || || | Sbjct 214104 CTTTCTGGATATTGTAATCGGAAAGGGTGCGTCCATCTTCTAGCTGTTTGCCAGCAAAAA 214163 Query 288344 TCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGT 288400 ||| | || ||| ||||| |||||||||||||| ||||| || || || || | Sbjct 214164 TCAATCTTTGCTGA---TCTGGAGGAATTCCTTCTTTATCTTGGATCTTTGCCTTAACAT 214220 Query 288401 TTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460 |||| || | || | ||| || || || || || || || || |||| ||| || | Sbjct 214221 TTTCAATTGTGTCTGAGGGTTCAACCTCAAGGGTAATTGTTTTACCCGTCAAAGTTTTCA 214280 Query 288461 CGAATATCTGCAT 288473 | || || ||||| Sbjct 214281 CAAAAATTTGCAT 214293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179404454457086