Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3969 105 8e-18 >seq3969 Length=6340 Score = 105 bits (116), Expect = 8e-18 Identities = 253/376 (67%), Gaps = 14/376 (4%) Strand=Plus/Plus Query 10783 CTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGT 10842 || ||| ||||| || || || || || | || |||||| | ||| ||||| || Sbjct 1651 CTGACGGTCAAAACGGCCCGGACGCAGCAATGCAGGGTCAAGCACGTCAGGACGGTTGGT 1710 Query 10843 CGCCGCGATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTG 10902 || || || || | ||||| | | ||||| |||||||||||| || | || Sbjct 1711 GGCGGCAATCACGATAATGCCTTCATTGCCTTCAAAACCATCCATCTCAACCAGCATCTG 1770 Query 10903 ATTGATGGTTTGTTCGCGTTCATCATTCGCGG-GCATACCACCCGCACTGCGTTGCTTAC 10961 || | ||||||||| |||||||||| | || | |||||||| ||||| || Sbjct 1771 GTTCAGGGTTTGTTCACGTTCATCATGACCACCGCCCAG-ACCCGCACCACGTTGGCGAC 1829 Query 10962 CGACGGCGTCAATTTCATCGATGAAAACGATACA-----CGGTTGATTTTCACGGGCAAC 11016 ||||||| || |||||||| ||||| | |||||| ||| | ||||| | || Sbjct 1830 CGACGGCATCGATTTCATCAATGAAGATGATACAAGGCGCGGCTT-TTTTCGCCTGC--- 1885 Query 11017 TTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGC 11076 || || || || || || | |||||||||||||| ||||| || ||||| | | Sbjct 1886 -TCGAACATGTCACGCACACGAGATGCACCGACACCCACGAACATCTCAACAAAGTCAGA 1944 Query 11077 GGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGG 11135 ||||| || | || || || || || | |||||| || || || ||| || |||| Sbjct 1945 ACCGGAA-ATGGTGAAAAATGGCACCTTCGCTTCACCGGCAATCGCCTTGGCAAGCAGGG 2003 Query 11136 TCTTCCCCGTCCCAGG 11151 |||| || || || || Sbjct 2004 TCTTACCTGTTCCCGG 2019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597230119543960