Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq57 138 1e-27 seq504 114 1e-20 >seq57 Length=2082711 Score = 138 bits (152), Expect = 1e-27 Identities = 161/215 (75%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || | ||||| || || || |||||||| |||||||| | | || || | || Sbjct 1619539 AAGAACCAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATC 1619598 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| | |||||| || ||| |||| || |||||||| || || |||||||||||||| || Sbjct 1619599 TTCTAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGAATTCCTTCTTTATC 1619658 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCA-CCGGCGTCCACTTCTACAGTTACGG 64409 || ||||| |||||| ||| | ||||||| |||| || ||||| | ||| | | Sbjct 1619659 CTGGATTTTAGCCTTTACGTTCTCTATTGTATCAGACGGC-TCAACTTCAAGAGTAATAG 1619717 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 | || || |||| |||||| || |||||||||||| Sbjct 1619718 TTTTTCCAGTCAGAGTTTTCACAAAAATTTGCATT 1619752 Score = 131 bits (144), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || | || ||| || || ||||| | || |||||||| ||||| || ||||||| Sbjct 1620665 CCTCCTCTCAGTCTGAGTACAAGATGTAGAGTAGATTCTTTCTGAATATTATAATCTGAA 1620724 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| | ||||| | |||||| ||||| | || | | || |||||||| ||| Sbjct 1620725 AGAGTGCGGCCATCTTCTAACTGCTTTCCGGCGAAGATTAATCTTTGTTGGTCGGGTGGA 1620784 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATC-ACCGGCGTCCAC 64395 ||||||||||| || || ||||| |||||| ||| | |||||| |||| || || Sbjct 1620785 ATTCCTTCTTTATCCTGGATTTTAGCCTTTACGTTCTCTATTGTATCTGACGGC-TCAAC 1620843 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||| | ||| | || || || |||| |||||||| |||||||||||| Sbjct 1620844 TTCAAGAGTAATAGTTTTTCCAGTCAGGGTTTTTACAAAAATTTGCATT 1620892 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 ||||| |||||||| || |||||||| | || ||||| || ||||| || ||||||| Sbjct 1618613 CCGCCACGCAATCTCAGTACTAGATGTAAAGTTGATTCCTTCTGAATATTATAATCTGAC 1618672 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | |||||| | ||||| | || || || || |||| | || |||||||| || || Sbjct 1618673 AAGGTGCGACCATCTTCCAATTGTTTCCCTGCGAAAATCAACCTTTGCTGGTCAGGTGGT 1618732 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCAC 64395 |||||||| || ||||| ||||| ||||| ||| || | || ||| | || || Sbjct 1618733 ATTCCTTCCTTGTCTTGAATTTTC-GCTTTCACATTTTCAATAGTGTCAGATGGTTCAAC 1618791 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | ||| | ||| || || ||||||||||| || || |||||||| Sbjct 1618792 TTCAAGAGTAATGGTTTTTCCAGTCAAAGTTTTCACAAATATTTGCAT 1618839 Score = 129 bits (142), Expect = 6e-25 Identities = 159/215 (74%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| |||| ||||| || || || |||||||| |||||||| | | || || | || Sbjct 1619083 AAGAACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATC 1619142 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| | |||||| || ||| |||| || |||||||| || || || |||||||| || || Sbjct 1619143 TTCCAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATC 1619202 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACT-GTATCACCGGCGTCCACTTCTACAGTTACGG 64409 || ||||| |||||| | | || | |||||| || || ||||| | ||| | | Sbjct 1619203 CTGGATTTTG-GCTTTAACATTTTCAATAGTATCAGAGGGCTCAACTTCAAGAGTAATTG 1619261 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 | || || |||| |||||| ||||||||||||||| Sbjct 1619262 TTTTTCCAGTCAGAGTTTTCACGAAAATTTGCATT 1619296 Score = 129 bits (142), Expect = 6e-25 Identities = 157/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| |||| ||||| || || || |||||||| |||||||| | | || || | || Sbjct 1620451 AAGAACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATC 1620510 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| | |||||| || ||| |||| || |||||||| || || || |||||||| || || Sbjct 1620511 TTCCAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATC 1620570 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || ||||| |||||| || | |||||| || |||||||| | ||| | || Sbjct 1620571 CTGGATTTTGGCTTTTACATTTTCAATAGTATCAGAGGGCTCCACTTCAAGAGTAATTGT 1620630 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || || |||| |||||| || |||||||||||| Sbjct 1620631 TTTTCCAGTCAGAGTTTTCACAAAAATTTGCATT 1620664 Score = 120 bits (132), Expect = 3e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 || ||| || | ||| | ||| || || || || || |||||||| | | ||| || | Sbjct 1621132 TCGAAGAACCAAATGCAACGTGGACTCCTTCTGTATATTGTAATCGGATAGGGTACGACC 1621191 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 ||||| | |||||| || ||| |||| | || ||||| || ||||| |||||||| || Sbjct 1621192 ATCTTCCAACTGCTTTCCAGCAAAAATTAATCGTTGCTGATCAGGAGGGATTCCTTCCTT 1621251 Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 ||||| ||||| |||||| || | ||||| | || ||||| | ||||| Sbjct 1621252 ATCTTGAATTTTAGCCTTTACGTTTTCAATAGTATCTGAAGGCTCAACTTCAAGAGTTAT 1621311 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||||| || ||||| ||||||||||| || |||||||| Sbjct 1621312 TGTCTTCCCCGTCAACGTTTTTACGAAGATCTGCATTTT 1621350 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || | || ||| || || ||||| | || |||||||| || || || ||||||| | Sbjct 1619297 CCTCCTCTCAGTCTGAGTACAAGATGTAGAGTTGATTCTTTCTGGATATTATAATCTGAG 1619356 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| | ||||| |||||||| ||||| | || | || || ||||| || ||| Sbjct 1619357 AGAGTGCGGCCATCTTCTAGCTGCTTTCCGGCGAAGATTAACCTTTGTTGGTCTGGTGGA 1619416 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 ||||||||||| ||||| ||||| ||| ||| || | || ||| | || ||| Sbjct 1619417 ATTCCTTCTTTATCTTGAATTTTGGCCTTAACATTTTCGATAGTGTCAGATGGTTCAACT 1619476 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||| || || | ||| || || || || ||||| Sbjct 1619477 TCAAGTGTAATGGTCTTTCCTGTAAGAGTCTTCACAAAGATCTGCAT 1619523 Score = 98.7 bits (108), Expect = 1e-15 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 ||| || || ||||| | || |||||||| ||||| || ||||||| | ||||| | Sbjct 1620904 TCTGAGTACAAGATGTAGAGTAGATTCTTTCTGAATATTATAATCTGAAAGAGTGCGGCC 1620963 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 ||||| | |||||| ||||| | || | | || ||||| || |||||||||||||| Sbjct 1620964 ATCTTCTAACTGCTTTCCGGCGAAGATTAATCTTTGTTGGTCTGGCGGAATTCCTTCTTT 1621023 Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 ||||| ||||| ||| ||| || | ||| ||| | || ||||| | || | Sbjct 1621024 ATCTTGAATTTTAGCCTTAACATTTTCGATTGTGTCAGAAGGTTCAACTTCAAGTGTAAT 1621083 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || || || || | || || ||||| || |||||| Sbjct 1621084 CGTTTTTCCTGTAAGGGTCTTGACGAAGATCTGCATT 1621120 >seq504 Length=327254 Score = 114 bits (126), Expect = 1e-20 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313 |||| || || |||||||| | | |||||| | ||||| ||||| ||||| ||| ||| Sbjct 214104 CTTTCTGGATATTGTAATCGGAAAGGGTGCGTCCATCTTCTAGCTGTTTGCCAGCAAAAA 214163 Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCT 64373 | | | ||||| || ||||||||||||||||| ||||| || ||| ||| ||| | Sbjct 214164 TCAATCTTTGCTGATCTGGAGGAATTCCTTCTTTATCTTGGATCTTTGCCTTAACATTTT 214223 Query 64374 CCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433 | | ||| || || || || || | || | || || || ||||||||||| || | Sbjct 214224 CAATTGTGTCTGAGGGTTCAACCTCAAGGGTAATTGTTTTACCCGTCAAAGTTTTCACAA 214283 Query 64434 AAATTTGCATTTT 64446 |||||||||| || Sbjct 214284 AAATTTGCATATT 214296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499541517174280