Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_010342.1
Length=39245
Score E
Sequences producing significant alignments: (Bits) Value
seq1601 201 3e-47
>seq1601
Length=30922
Score = 201 bits (222), Expect = 3e-47
Identities = 371/540 (69%), Gaps = 12/540 (2%)
Strand=Plus/Plus
Query 21297 TGGATGGGCGGCAAGCGCCGCCTGGCTAAACATATCCTGCCGAACTTCCCTGACCACCAG 21356
||||| ||||| || || || ||||| ||||| || | ||| |||||| | ||
Sbjct 8274 TGGATAGGCGGTAAACGGCGACTGGCAAAACAGATTTTACCGCGCTTCCCGGCGCATACC 8333
Query 21357 TGCTACGTTGAGCCCTTCGCGGGCGGCGCGGCGCTGTTCTTCATGAAGCAACCCAGCAAA 21416
|||||||| ||||| || |||| |||||||| ||||| |||||| |||||| ||
Sbjct 8334 TGCTACGTGGAGCCATTTTGTGGCGCGGCGGCGCTCTTCTTTATGAAGTTACCCAGTAAG 8393
Query 21417 GTGGAGGTGATCAACGACACCAACAGCGACCTGGTCAACTTGTACCGGGTGGTGCAGCAC 21476
| ||||||||| ||||| | |||| |||| |||||||| | || |||||| || | |||
Sbjct 8394 GCGGAGGTGATTAACGATATCAACGGCGAGCTGGTCAATCTCTATCGGGTGCTGAAACAC 8453
Query 21477 CACCTGGAGGAGTTCGTGCGCCAGTTCAAGTGGGCGCTGGTCTCGCGTGAGATGTTCGCG 21536
|| ||||| ||||| |||||||||| || |||||||||||| || | |||||
Sbjct 8454 CATCTGGAAGAGTTTATGCGCCAGTTTAAATGGGCGCTGGTCAGCCGGGCGATGTATCAA 8513
Query 21537 TGGGAGAAGCTCAAGCACACCGACACGCTAACGGATATCCAG-CGGGCCGCGCGGTTCTA 21595
||| || | | || ||||| || |||| |||| || || || || | |||||
Sbjct 8514 TGGTTAAACATTACGCCGACCGAGACCTTAACCGATAGGAAGCCGCGCGGCCTGTTTCTA 8573
Query 21596 CTACCTGCAGCAGCAGGGGTTTGGCGGGAAGGTC----AACTCGAACTTTGGCATCTCGA 21651
|||||||| | |||| ||| ||||| || ||| ||| | | ||| ||||| | |
Sbjct 8574 TTACCTGCAAAAACAGGCGTTCGGCGGTAAAGTCGCCGAACAC-ACCTTCGGCATTGCCA 8632
Query 21652 CCACGTCTGGCCCTGGGCTTAACCTGCTGCGGATCGAGGAGAACCTCAGCCAGGCGCACT 21711
|||| || || | || |||||||| || || || ||| | || | || ||
Sbjct 8633 CCACCAGAGGGCCACGCCTGAACCTGCTACGCATGGAAGAGGAGCTGTCGCTCGCTCATC 8692
Query 21712 TGCGGCTCTCGCGCGTGTTCGTTGAGAACATGGACTGGAAAGCGGTCATGAAGCGCTACG 21771
|||| | || ||| | |||| | || || ||| | | ||| || || |
Sbjct 8693 TGCGATTGTCACGCACCACCATTGAACAAATCGATTGGTCAACCTGCATTGCCCGTTATG 8752
Query 21772 ACCGGCCGCACACG---TTGCACTATCTCGACCCGCCGTATTGGGCGACCGCTGGCTATG 21828
|||| ||||||||| || ||| | |||||||||||||||| || | |||||||
Sbjct 8753 ACCGTCCGCACACGCTCTTTTACTGT---GACCCGCCGTATTGGGGTACTGAGGGCTATG 8809
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 125437762085958
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |