Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq57 104 2e-17
>seq57
Length=2082711
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| | ||| | ||||||||| | | | |||||||||||||| ||||| ||
Sbjct 1620437 CCACCTCTAAGACGAAGAACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGAT 1620496
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || || || | || || || | | | || |||||||| || || || ||
Sbjct 1620497 AGAGTTCGGCCATCTTCCAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGG 1620556
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| ||||| || || |||||| ||||| | ||| | || || | | ||||||
Sbjct 1620557 ATTCCTTCCTTATCCTGGATTTTGGCTTTTACATTTTCAATAGTATCAGAGGGCTCCACT 1620616
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | ||||| |||||||||||||| |||||||| |||||
Sbjct 1620617 TCAAGAGTAATTGTTTTTCCAGTCAGAGTTTTCACAAAAATTTGCAT 1620663
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464
||| ||||| | | | |||||||||||||| ||||| || | ||| || || ||
Sbjct 1619542 AACCAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTC 1619601
Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524
| || || || | | | || |||||||| || || || || || |||||||| ||
Sbjct 1619602 TAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGAATTCCTTCTTTATCCTG 1619661
Query 138525 GATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584
|||||| |||| | || | || || | || ||| || || | || | |||||
Sbjct 1619662 GATTTTAGCCTTTACGTTCTCTATTGTATCAGACGGCTCAACTTCAAGAGTAATAGTTTT 1619721
Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||||||||||||| |||||||| |||||
Sbjct 1619722 TCCAGTCAGAGTTTTCACAAAAATTTGCAT 1619751
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| | ||| | ||||||||| | | | |||||||||||||| ||||| ||
Sbjct 1619069 CCACCTCTAAGACGAAGAACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGAT 1619128
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || || || | || || || | | | || |||||||| || || || ||
Sbjct 1619129 AGAGTTCGGCCATCTTCCAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGG 1619188
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| ||||| || || |||||| ||| | | ||| | || || | | ||| ||
Sbjct 1619189 ATTCCTTCCTTATCCTGGATTTTGGCTTTAACATTTTCAATAGTATCAGAGGGCTCAACT 1619248
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | ||||| |||||||||||||| || ||||| |||||
Sbjct 1619249 TCAAGAGTAATTGTTTTTCCAGTCAGAGTTTTCACGAAAATTTGCAT 1619295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496159816358640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |