Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq57 136 3e-27 seq504 100 2e-16 seq252 82.4 5e-11 >seq57 Length=2082711 Score = 136 bits (150), Expect = 3e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||||||||||||||| || || ||||| || |||||||| ||| ||| | ||||| Sbjct 1620454 AACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTC 1620513 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 || || || ||||| | || | |||||| || || ||| ||||||||||| || Sbjct 1620514 CAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTG 1620573 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 |||||| ||||||| |||| |||||||| || || || | ||||| ||||| Sbjct 1620574 GATTTTGGCTTTTACATTTTCAATAGTATCAGAGGGCTCCACTTCAAGAGTAATTGTTTT 1620633 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || ||||||||||| |||||||||||||| Sbjct 1620634 TCCAGTCAGAGTTTTCACAAAAATTTGCAT 1620663 Score = 127 bits (140), Expect = 1e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||||||||||||||| || || ||||| || |||||||| ||| ||| | ||||| Sbjct 1619086 AACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTC 1619145 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 || || || ||||| | || | |||||| || || ||| ||||||||||| || Sbjct 1619146 CAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTG 1619205 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 |||||| ||| ||| |||| |||||||| || || || | ||||| ||||| Sbjct 1619206 GATTTTGGCTTTAACATTTTCAATAGTATCAGAGGGCTCAACTTCAAGAGTAATTGTTTT 1619265 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || ||||||||||| || ||||||||||| Sbjct 1619266 TCCAGTCAGAGTTTTCACGAAAATTTGCAT 1619295 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || ||||| | ||| | || | ||| | || || ||||| || ||||| ||||| Sbjct 1618841 CCTCCTCGAAGTCTAAGGACAAGATGCAATGTTGACTCTTTCTGAATGTTATAATCAGAA 1618900 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| ||| | ||||| || ||||| |||||| | ||||| | || || ||| || Sbjct 1618901 AGAGTTCGACCATCTTCCAACTGTTTCCCAGCGAAAATCAACCTTTGCTGATCGGGAGGG 1618960 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||||||||| || ||| || ||||||| |||| || ||||| | |||||| Sbjct 1618961 ATTCCTTCCTTATCTTGAATCTTAGCTTTTACATTTTCAATTGTATCAGAAGGTTCTACT 1619020 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 ||||||||||| ||||| ||||| | |||||| || || || |||||| Sbjct 1619021 TCTAAGGTAATCGTTTTTCCTGTTAAAGTTTTCACGAATATCTGCATA 1619068 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| || |||||| || | |||||| || || ||||| || || |||||||| Sbjct 1619981 CCTCCTCTCAGTCTTAAGACAAGATGAAGAGTTGATTCTTTCTGAATATTGTAATCAGAA 1620040 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | | |||||||| ||||| |||||| | ||||| | || ||||| ||| Sbjct 1620041 AGGGTGCGCCCATCTTCTAACTGTTTCCCAGCGAAAATCAACCTTTGCTGGTCAGGTGGT 1620100 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||||||||| || ||| || ||||||| |||| || || || | |||||| Sbjct 1620101 ATTCCTTCCTTATCTTGAATCTTCGCTTTTACATTTTCAATTGTGTCAGAAGGTTCTACT 1620160 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | ||||| || || ||||| ||||| || || || || ||||| Sbjct 1620161 TCAAGAGTAATAGTCTTTCCTGTAAGAGTCTTAACGAAGATCTGCAT 1620207 Score = 118 bits (130), Expect = 8e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| ||||||||||| || || ||||| || |||||||| ||| ||| | ||||| Sbjct 1619542 AACCAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTC 1619601 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 ||| || || ||||| | || | |||||| || || |||||||||||| || || Sbjct 1619602 TAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGAATTCCTTCTTTATCCTG 1619661 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 ||||| ||||| | ||||| ||||| || || || | ||||| ||||| Sbjct 1619662 GATTTTAGCCTTTACGTTCTCTATTGTATCAGACGGCTCAACTTCAAGAGTAATAGTTTT 1619721 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || ||||||||||| |||||||||||||| Sbjct 1619722 TCCAGTCAGAGTTTTCACAAAAATTTGCAT 1619751 Score = 116 bits (128), Expect = 3e-21 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || || |||||||| | |||| ||| | || || || || || || || ||||| || Sbjct 1618613 CCGCCACGCAATCTCAGTACTAGATGTAAAGTTGATTCCTTCTGAATATTATAATC--TG 1618670 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | || || | ||||| |||||||| || ||| | ||||| | || ||||| || Sbjct 1618671 ACAAGGTGCGACCATCTTCCAATTGTTTCCCTGCGAAAATCAACCTTTGCTGGTCAGGTG 1618730 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 | |||||||||||||| |||||| ||| ||| |||| ||||| || ||| | Sbjct 1618731 GTATTCCTTCCTTGTCTTGAATTTTCGCTTTCACATTTTCAATAGTGTCAGATGGTTCAA 1618790 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | || | ||||||||||| || |||| |||||| ||||| ||||||||| Sbjct 1618791 CTTCAAGAGTAATGGTTTTTCCAGTCAAAGTTTTCACAAATATTTGCATA 1618840 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| || ||| | || | ||| || ||||| ||||| || || || ||||| Sbjct 1620665 CCTCCTCTCAGTCTGAGTACAAGATGTAGAGTAGATTCTTTCTGAATATTATAATCTGAA 1620724 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | |||||||| || || || ||| | || || | ||||||||| |||| Sbjct 1620725 AGAGTGCGGCCATCTTCTAACTGCTTTCCGGCGAAGATTAATCTTTGTTGGTCGGGTGGA 1620784 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||| || || ||||| ||||| | ||||| ||||| || || Sbjct 1620785 ATTCCTTCTTTATCCTGGATTTTAGCCTTTACGTTCTCTATTGTATCTGACGGCTCAACT 1620844 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | ||||| ||||| || ||||| |||||||||||||||||||| Sbjct 1620845 TCAAGAGTAATAGTTTTTCCAGTCAGGGTTTTTACAAAAATTTGCAT 1620891 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| || ||| | || | ||| || || || ||||| || || || ||||| | Sbjct 1619297 CCTCCTCTCAGTCTGAGTACAAGATGTAGAGTTGATTCTTTCTGGATATTATAATCTGAG 1619356 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | ||||||| || || || ||| | || || | |||||||| |||| Sbjct 1619357 AGAGTGCGGCCATCTTCTAGCTGCTTTCCGGCGAAGATTAACCTTTGTTGGTCTGGTGGA 1619416 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||| || || ||||||| || ||| |||| ||||| || ||| || Sbjct 1619417 ATTCCTTCTTTATCTTGAATTTTGGCCTTAACATTTTCGATAGTGTCAGATGGTTCAACT 1619476 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | |||||||| || ||||| ||||| || ||||| || |||||| Sbjct 1619477 TCAAGTGTAATGGTCTTTCCTGTAAGAGTCTTCACAAAGATCTGCATA 1619524 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 14962 CTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCG 15021 |||| || | ||| | ||||| ||||| || || ||||| || ||| | | | Sbjct 1619765 CTTAGTACAAGATGTAAAGTAGATTCTTTCTGGATATTGTAGTCAGACAGAGTGCGACCA 1619824 Query 15022 TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTG 15081 ||||| || || ||||| || | ||||| | |||||| || |||||| ||||| || Sbjct 1619825 TCTTCCAACTGCTTGCCTGCAAAGATCAATCTCTGTTGATCTGGTGGAATACCTTCTTTA 1619884 Query 15082 TCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141 || |||||| ||| ||| ||||||| || || ||| || |||||||||||| Sbjct 1619885 TCTTGAATTTTAGCTTTCACATTTTCTATCGTGTCAGACGGTTCCACTTCTAAGGTAATG 1619944 Query 15142 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || || | || || ||||| || ||||| Sbjct 1619945 GTCTTTCCAGTTAAGGTCTTAACAAATATCTGCAT 1619979 >seq504 Length=327254 Score = 100 bits (110), Expect = 2e-16 Identities = 145/202 (72%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 14984 AATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGT 15043 || |||| || || ||||||||| || | | | ||||||| ||||||||||| Sbjct 214101 AACCTTTCTGGATATTGTAATCGGAAAGGGTGCGTCCATCTTCTAGCTGTTTGCCAGCAA 214160 Query 15044 ATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACA 15102 | ||||| | || || || ||||||||||| || || || ||||| || ||| Sbjct 214161 AAATCAATCTTTGCTGATCTGGAGGAATTCCTTCTTTATCTTGGATCTTTGC-CTTAACA 214219 Query 15103 ATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTT 15162 |||| || || || ||| || || | |||||| |||||||| |||| |||||| Sbjct 214220 TTTTCAATTGTGTCTGAGGGTTCAACCTCAAGGGTAATTGTTTTACCCGTCAAAGTTTTC 214279 Query 15163 ACAAAAATTTGCATATTTGAAA 15184 |||||||||||||||||| ||| Sbjct 214280 ACAAAAATTTGCATATTTTAAA 214301 >seq252 Length=802098 Score = 82.4 bits (90), Expect = 5e-11 Identities = 95/127 (75%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 ||| ||||| || || ||| || ||||||| |||| |||||||| |||||| Sbjct 443714 AATACCTTCTTTATCCTGAATCTTAGCTTTTACATTTTCAATAGTATCCGAGGATTCTAC 443655 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAATAAA 15188 || | |||||| |||||||| || || |||||||||||||| ||||| | || | | | Sbjct 443654 CTCAAGGGTAATTGTTTTACCCGTGAGGGTTTTTACAAAAATCTGCATTTCTG-AGCAGA 443596 Query 15189 TTTTTTA 15195 ||||||| Sbjct 443595 TTTTTTA 443589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357319969541045