Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_011589.1
Length=40287
Score E
Sequences producing significant alignments: (Bits) Value
seq1601 107 5e-19
>seq1601
Length=30922
Score = 107 bits (118), Expect = 5e-19
Identities = 250/371 (67%), Gaps = 6/371 (2%)
Strand=Plus/Plus
Query 24842 CCGCACTTCCCGACCCACGACTGCTACGTCGAGGCATTCGCCGGCGGTGCCGCGTCGTTG 24901
|||| ||||||| | || ||||||||| ||| |||| |||| || ||| ||
Sbjct 8313 CCGCGCTTCCCGGCGCATACCTGCTACGTGGAGCCATTTTGTGGCGCGGCGGCGCTCTTC 8372
Query 24902 CTTATGCGGCCGTACCCAGCACAGATGGAGGTGCTCAACGACATCAACGGCGAGCTGGTG 24961
||||| | ||||||| | || ||||||| | ||||| |||||||||||||||||
Sbjct 8373 TTTATGAAGT--TACCCAGTA-AGGCGGAGGTGATTAACGATATCAACGGCGAGCTGGTC 8429
Query 24962 TCCCTGTA-CCGCTGCGTGCGCCACCACCTGGATGAGTTCGTGCGCATGTTCCGCTGGTC 25020
|| || | | ||| || ||||| ||||| ||||| ||||| ||| ||| |
Sbjct 8430 AATCTCTATCGGGTGC-TGAAACACCATCTGGAAGAGTTTATGCGCCAGTTTAAATGGGC 8488
Query 25021 CCTGGTCTCGCGACAGATGTTCGAGTGGGCACAGATGGAGCGCCCGGAGACGCTGACCGA 25080
|||||| || ||||| | ||| | | || || | ||||| | |||||
Sbjct 8489 GCTGGTCAGCCGGGCGATGTATCAATGGTTAAACATTACGCCGACCGAGACCTTAACCGA 8548
Query 25081 CATCCAG-CGCGCAGCGCGGTTCTACTACCTGCAAAAGCTGGCATTCGGCGGCAAGGTGC 25139
| || ||||| || | ||||| ||||||||||| | ||| |||||||| || ||
Sbjct 8549 TAGGAAGCCGCGCGGCCTGTTTCTATTACCTGCAAAAACAGGCGTTCGGCGGTAAAGTCG 8608
Query 25140 AGGGGCAATCGTTCGGTGTGGTGACGGCTGGTGGGCCGCGATTGAACCTTCTGCGCATTG 25199
| || | ||||| | | || | | ||||| || ||||||| || ||||| |
Sbjct 8609 CCGAACACACCTTCGGCATTGCCACCACCAGAGGGCCACGCCTGAACCTGCTACGCATGG 8668
Query 25200 AAGAGGAACTG 25210
||||||| |||
Sbjct 8669 AAGAGGAGCTG 8679
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 128771507286906
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |