Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq57 105 6e-18 seq504 95.1 1e-14 >seq57 Length=2082711 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| | | ||| | |||||||| | ||| ||||| || || |||||||||||| Sbjct 1621120 TCCACCTCTGAGTCGAAGAACCAAATGCAACGTGGACTCCTTCTGTATATTGTAATCGGA 1621179 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || ||| ||| || | ||| |||||||| | || ||||| |||||||| ||||| Sbjct 1621180 TAGGGTACGACCATCTTCCAACTGCTTTCCAGCAAAAATTAATCGTTGCTGATCAGGAGG 1621239 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||| || ||||| ||| | | ||| | || || | | ||| || Sbjct 1621240 GATTCCTTCCTTATCTTGAATTTTAGCCTTTACGTTTTCAATAGTATCTGAAGGCTCAAC 1621299 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | || || || |||| |||||||| || |||||||| Sbjct 1621300 TTCAAGAGTTATTGTCTTCCCCGTCAACGTTTTTACGAAGATCTGCAT 1621347 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||| | || ||||| ||||||||||||||||| | || || ||| ||| Sbjct 1619543 ACCAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTCT 1619602 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 | ||| |||||||| | || | ||||||||||| || || || || || || ||| | Sbjct 1619603 AACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGAATTCCTTCTTTATCCTGG 1619662 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 ||||| ||| | | || | || || | ||| ||||| | || | ||||| Sbjct 1619663 ATTTTAGCCTTTACGTTCTCTATTGTATCAGACGGCTCAACTTCAAGAGTAATAGTTTTT 1619722 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||||||||| |||||||| ||||| Sbjct 1619723 CCAGTCAGAGTTTTCACAAAAATTTGCAT 1619751 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 || ||||| | || ||||| ||||||||||||||||| | || || ||| || Sbjct 1620455 ACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTCC 1620514 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 | ||| |||||||| | || | ||||||||||| || || || || ||||| ||| | Sbjct 1620515 AACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTGG 1620574 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 ||||| || | | ||| | || || | ||| ||||| | || | ||||| Sbjct 1620575 ATTTTGGCTTTTACATTTTCAATAGTATCAGAGGGCTCCACTTCAAGAGTAATTGTTTTT 1620634 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||||||||| |||||||| ||||| Sbjct 1620635 CCAGTCAGAGTTTTCACAAAAATTTGCAT 1620663 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 126910 ATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTG 126969 ||||| ||||| ||||| |||||||| ||||| | ||||| ||| |||| ||| Sbjct 1620688 ATGTAGAGTAGATTCTTTCTGAATATTATAATCTGAAAGAGTGCGGCCATCTTCTAACTG 1620747 Query 126970 TTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTT 127029 ||||| ||| |||| |||| || || ||||| || || || || || ||| |||||| Sbjct 1620748 CTTTCCGGCGAAGATTAATCTTTGTTGGTCGGGTGGAATTCCTTCTTTATCCTGGATTTT 1620807 Query 127030 CTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089 ||| | | || | || || | ||| ||||| | || | ||||| || || Sbjct 1620808 AGCCTTTACGTTCTCTATTGTATCTGACGGCTCAACTTCAAGAGTAATAGTTTTTCCAGT 1620867 Query 127090 CAGAGTTTTTACAAAAATCTGCAT 127113 ||| |||||||||||||| ||||| Sbjct 1620868 CAGGGTTTTTACAAAAATTTGCAT 1620891 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 || ||||| | || ||||| ||||||||||||||||| | || || ||| || Sbjct 1619087 ACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTCC 1619146 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 | ||| |||||||| | || | ||||||||||| || || || || ||||| ||| | Sbjct 1619147 AACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTGG 1619206 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 ||||| || | | ||| | || || | ||| ||||| | || | ||||| Sbjct 1619207 ATTTTGGCTTTAACATTTTCAATAGTATCAGAGGGCTCAACTTCAAGAGTAATTGTTTTT 1619266 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||||||||| || ||||| ||||| Sbjct 1619267 CCAGTCAGAGTTTTCACGAAAATTTGCAT 1619295 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| ||||| || ||||| | || ||| ||| || | |||||| ||| Sbjct 1618871 GTTGACTCTTTCTGAATGTTATAATCAGAAAGAGTTCGACCATCTTCCAACTGTTTCCCA 1618930 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TT 127035 ||| | ||||| | |||||||||||||| || || ||||| | | ||| | | || || Sbjct 1618931 GCGAAAATCAACCTTTGCTGATCGGGAGGGATTCCTTCCTTAT-CTTGAATCTTAGCTTT 1618989 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | | ||| | || || | | || ||||| | ||| | |||||| || || | ||| Sbjct 1618990 TACATTTTCAATTGTATCAGAAGGTTCTACTTCTAAGGTAATCGTTTTTCCTGTTAAAGT 1619049 Query 127096 TTTTACAAAAATCTGCAT 127113 ||| || || |||||||| Sbjct 1619050 TTTCACGAATATCTGCAT 1619067 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||| | ||| |||||||| || ||||||||||| || |||||| ||| || Sbjct 1620227 ACCAAATGCAACGTGGACTCTTTCTGTATATTGTAATCAGACAGTGTGCGACCATCTTCC 1620286 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 | ||| || || || ||||||| | ||| ||||| || || || || || || | | || Sbjct 1620287 AACTGCTTGCCTGCAAAGATCAACCTCTGTTGATCTGGTGGAATACCTTCTTTAT-CTTG 1620345 Query 127025 ATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 | ||| || || | | ||| | || || | || ||||| | ||| | ||||| Sbjct 1620346 AATTTTAGCTTTCACATTTTCAATTGTATCAGATGGTTCTACTTCTAAGGTGATGGTTTT 1620405 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| | ||||| || || |||||||| Sbjct 1620406 TCCGGTTAACGTTTTGACGAATATCTGCAT 1620435 >seq504 Length=327254 Score = 95.1 bits (104), Expect = 1e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 126924 CTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGA 126983 |||| || |||||||||||| | ||||| ||| ||||||||||| ||||| | | Sbjct 214104 CTTTCTGGATATTGTAATCGGAAAGGGTGCGTCCATCTTCTAGCTGTTTGCCAGCAAAAA 214163 Query 126984 TCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTT 127043 |||||| |||||||| ||||| || || || || || ||| || ||| | | || Sbjct 214164 TCAATCTTTGCTGATCTGGAGGAATTCCTTCTTTATCTTGGATCTTTGCCTTAACATTTT 214223 Query 127044 CGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 127103 | | ||||| | || || || | ||| | ||||| || |||| |||||| |||| Sbjct 214224 CAATTGTGTCTGAGGGTTCAACCTCAAGGGTAATTGTTTTACCCGTCAAAGTTTTCACAA 214283 Query 127104 AAATCTGCAT 127113 |||| ||||| Sbjct 214284 AAATTTGCAT 214293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475402508040880