Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_012223.2 Length=44899 Score E Sequences producing significant alignments: (Bits) Value seq1577 89.7 1e-13 >seq1577 Length=31499 Score = 89.7 bits (98), Expect = 1e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 28986 CCGAGGCGTTCGCCCCCGTCGACAAACCACGTCTGGCCCCATAGGTCTTTTAGTCCGTTT 29045 || ||||| | |||| ||||||||||||| || ||||| |||||| || |||||| Sbjct 18247 CCCAGGCGCTGGCCCTGATCGACAAACCACGCTTGCCCCCACAGGTCTACCAGACCGTTT 18306 Query 29046 GGTGCGGGTGTGCCGGTCAGGTTAATCCAGCGCTTGACGTGCTTATGTGCGA 29097 ||||| || |||||||| || || |||||| | ||| || |||||||||| Sbjct 18307 GGTGCTGGCGTGCCGGTGAGATTGCCCCAGCGGTGGACATGATTATGTGCGA 18358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143527009078434