Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq57 154 1e-32
seq504 98.7 9e-16
>seq57
Length=2082711
Score = 154 bits (170), Expect = 1e-32
Identities = 181/242 (75%), Gaps = 6/242 (2%)
Strand=Plus/Plus
Query 45103 TTTATTTTA--TTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGAT 45160
|||| |||| |||| || || | |||| |||||||| | ||||||||||| || ||
Sbjct 1618600 TTTAATTTAGTTTCCGCCACGCAATCTCAGTACTAGATGTAAAGTTGATTCCTTCTGAAT 1618659
Query 45161 ATTATAATCGCTGAC--GGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGT 45218
|||||||| ||||| ||| | ||| ||||||||||| |||||| | ||||| | |
Sbjct 1618660 ATTATAAT--CTGACAAGGTGCGACCATCTTCCAATTGTTTCCCTGCGAAAATCAACCTT 1618717
Query 45219 TGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTG 45278
|||||||| || || || ||||| || ||||||||||| ||| | ||| | |||
Sbjct 1618718 TGCTGGTCAGGTGGTATTCCTTCCTTGTCTTGAATTTTCGCTTTCACATTTTCAATAGTG 1618777
Query 45279 TCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGC 45338
|| || | || ||||| ||||||| ||||| || || | |||||| ||||| ||||||
Sbjct 1618778 TCAGATGGTTCAACTTCAAGAGTAATGGTTTTTCCAGTCAAAGTTTTCACAAATATTTGC 1618837
Query 45339 AT 45340
||
Sbjct 1618838 AT 1618839
Score = 129 bits (142), Expect = 5e-25
Identities = 171/233 (73%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|||||||| | || || | || ||||| || || ||||| || || |||||||||||
Sbjct 1620662 ATTCCTCCTCTCAGTCTGAGTACAAGATGTAGAGTAGATTCTTTCTGAATATTATAATC- 1620720
Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228
||| | | | ||| || || || ||||| ||| | || |||| ||| ||||| |
Sbjct 1620721 -TGAAAGAGTGCGGCCATCTTCTAACTGCTTTCCGGCGAAGATTAATCTTTGTTGGTCGG 1620779
Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGAC 45287
| ||||| ||||||||||| || ||||| || | || | |||| || || || | |
Sbjct 1620780 GTGGAATTCCTTCTTTATCCTGGATTTTAGCCTTTA-CGTTCTCTATTGTATCTGACGGC 1620838
Query 45288 TCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| ||||| ||||||| ||||| || || || ||||||||||||||||||||
Sbjct 1620839 TCAACTTCAAGAGTAATAGTTTTTCCAGTCAGGGTTTTTACAAAAATTTGCAT 1620891
Score = 120 bits (132), Expect = 3e-22
Identities = 167/232 (72%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|||||||| | || || | || ||||| || || ||||| || || |||||||||||
Sbjct 1620890 ATTCCTCCTCTTAGTCTGAGTACAAGATGTAGAGTAGATTCTTTCTGAATATTATAATC- 1620948
Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228
||| | | | ||| || || || ||||| ||| | || |||| ||| ||||| |
Sbjct 1620949 -TGAAAGAGTGCGGCCATCTTCTAACTGCTTTCCGGCGAAGATTAATCTTTGTTGGTCTG 1621007
Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288
||||||| |||||||||||||||||||| || | ||| | ||||| |||| |
Sbjct 1621008 GCGGAATTCCTTCTTTATCTTGAATTTTAGCCTTAACATTTTCGATTGTGTCAGAAGGTT 1621067
Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| || |||| |||||| || || || || || || || || |||||
Sbjct 1621068 CAACTTCAAGTGTAATCGTTTTTCCTGTAAGGGTCTTGACGAAGATCTGCAT 1621119
Score = 118 bits (130), Expect = 1e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|||||||| | || || || || ||||| || |||||||| || || ||||| |||||
Sbjct 1619978 ATTCCTCCTCTCAGTCTTAAGACAAGATGAAGAGTTGATTCTTTCTGAATATTGTAATCA 1620037
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| ||| || || ||||| || ||| | ||||| | ||||||||| ||
Sbjct 1620038 GAAAGGGTGCGCCCATCTTCTAACTGTTTCCCAGCGAAAATCAACCTTTGCTGGTCAGGT 1620097
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|| || ||||| ||||||||||| || ||| | ||| | ||||| |||| ||
Sbjct 1620098 GGTATTCCTTCCTTATCTTGAATCTTCGCTTTTACATTTTCAATTGTGTCAGAAGGTTCT 1620157
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| ||||||| || || || || ||||| || || || || |||||
Sbjct 1620158 ACTTCAAGAGTAATAGTCTTTCCTGTAAGAGTCTTAACGAAGATCTGCAT 1620207
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| || || || | || ||||||| ||||| || || || || ||||||||
Sbjct 1618838 ATACCTCCTCGAAGTCTAAGGACAAGATGCAATGTTGACTCTTTCTGAATGTTATAATCA 1618897
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | ||| ||||| ||||| || ||| | ||||| | |||||| || ||
Sbjct 1618898 GAAAGAGTTCGACCATCTTCCAACTGTTTCCCAGCGAAAATCAACCTTTGCTGATCGGGA 1618957
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|| || ||||| ||||||||||| || ||| | ||| | || || |||| ||
Sbjct 1618958 GGGATTCCTTCCTTATCTTGAATCTTAGCTTTTACATTTTCAATTGTATCAGAAGGTTCT 1619017
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| | |||| |||||| || |||| |||||| || || || |||||
Sbjct 1619018 ACTTCTAAGGTAATCGTTTTTCCTGTTAAAGTTTTCACGAATATCTGCAT 1619067
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|||||||| | || || | || ||||| || |||||||| || ||||||||||||||
Sbjct 1619294 ATTCCTCCTCTCAGTCTGAGTACAAGATGTAGAGTTGATTCTTTCTGGATATTATAATCT 1619353
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| || ||| || | || ||||| ||| | || || | ||| ||||| ||
Sbjct 1619354 GAGAGAGTGCGGCCATCTTCTAGCTGCTTTCCGGCGAAGATTAACCTTTGTTGGTCTGGT 1619413
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
||||| |||||||||||||||||||| || | ||| | ||||| || | ||
Sbjct 1619414 GGAATTCCTTCTTTATCTTGAATTTTGGCCTTAACATTTTCGATAGTGTCAGATGGTTCA 1619473
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || |||| || || || || ||||| || ||||| || |||||
Sbjct 1619474 ACTTCAAGTGTAATGGTCTTTCCTGTAAGAGTCTTCACAAAGATCTGCAT 1619523
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
||||| || | ||| | | || | ||||| ||| || ||||| || ||||| ||||||
Sbjct 1621118 ATTCCACCTCTGAGTCGAAGAACCAAATGCAACGTGGACTCCTTCTGTATATTGTAATCG 1621177
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | ||| ||||| || ||||| || | || ||||||||||| || ||
Sbjct 1621178 GATAGGGTACGACCATCTTCCAACTGCTTTCCAGCAAAAATTAATCGTTGCTGATCAGGA 1621237
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|| || ||||| |||||||||||||| || | ||| | || || |||| |||
Sbjct 1621238 GGGATTCCTTCCTTATCTTGAATTTTAGCCTTTACGTTTTCAATAGTATCTGAAGGCTCA 1621297
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| ||||| | || || || || | |||||||| || || |||||
Sbjct 1621298 ACTTCAAGAGTTATTGTCTTCCCCGTCAACGTTTTTACGAAGATCTGCAT 1621347
Score = 107 bits (118), Expect = 2e-18
Identities = 164/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || | ||||| | || | ||| || || || |||||||| ||||| |||||
Sbjct 1619522 ATACCCCCTCTGAGCCGAAGAACCAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCA 1619581
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| ||| || || || ||||| || | || | || ||||| || ||
Sbjct 1619582 GATAGAGTTCGGCCATCTTCTAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGT 1619641
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||| ||||||||||| || ||||| || | || | |||| || || || | |||
Sbjct 1619642 GGAATTCCTTCTTTATCCTGGATTTTAGCCTTTA-CGTTCTCTATTGTATCAGACGGCTC 1619700
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| ||||||| ||||| || || |||||||| ||||||||||||||
Sbjct 1619701 AACTTCAAGAGTAATAGTTTTTCCAGTCAGAGTTTTCACAAAAATTTGCAT 1619751
Score = 107 bits (118), Expect = 2e-18
Identities = 164/232 (71%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|||||||| | ||||| | || ||||| | || ||||| || |||||||| || ||
Sbjct 1619750 ATTCCTCCTCTAAGCCTTAGTACAAGATGTAAAGTAGATTCTTTCTGGATATTGTAGTCA 1619809
Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228
||| | | || ||| ||||| || || ||||| | ||||||| || || || |
Sbjct 1619810 --GACAGAGTGCGACCATCTTCCAACTGCTTGCCTGCAAAGATCAATCTCTGTTGATCTG 1619867
Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288
| ||||| |||||||||||||||||||| ||| | ||||| ||||| || | |
Sbjct 1619868 GTGGAATACCTTCTTTATCTTGAATTTTAGCTTTCACATTTTCTATCGTGTCAGACGGTT 1619927
Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| | |||| || || || |||| || || ||||| || |||||
Sbjct 1619928 CCACTTCTAAGGTAATGGTCTTTCCAGTTAAGGTCTTAACAAATATCTGCAT 1619979
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|||| ||| || || || |||||||| ||||| ||||| | ||| ||| |||
Sbjct 1620455 ACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTCC 1620514
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
|| || ||||| || | || | || ||||| || || || || ||||| ||||| ||
Sbjct 1620515 AACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTGG 1620574
Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311
||||| ||| | ||| | || || || | ||| ||||| ||||||| |||||
Sbjct 1620575 ATTTTGGCTTTTACATTTTCAATAGTATCAGAGGGCTCCACTTCAAGAGTAATTGTTTTT 1620634
Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || |||||||| ||||||||||||||
Sbjct 1620635 CCAGTCAGAGTTTTCACAAAAATTTGCAT 1620663
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|||| ||| || || || |||||||| ||||| ||||| | ||| ||| |||
Sbjct 1619087 ACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTCC 1619146
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
|| || ||||| || | || | || ||||| || || || || ||||| ||||| ||
Sbjct 1619147 AACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTGG 1619206
Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311
||||| ||| | ||| | || || || | ||| ||||| ||||||| |||||
Sbjct 1619207 ATTTTGGCTTTAACATTTTCAATAGTATCAGAGGGCTCAACTTCAAGAGTAATTGTTTTT 1619266
Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || |||||||| || |||||||||||
Sbjct 1619267 CCAGTCAGAGTTTTCACGAAAATTTGCAT 1619295
Score = 93.3 bits (102), Expect = 4e-14
Identities = 161/232 (69%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
||||| || | ||| | | || | ||||| ||| || || || || ||||| |||||
Sbjct 1620206 ATTCCACCTCTGAGACGAAGAACCAAATGCAACGTGGACTCTTTCTGTATATTGTAATCA 1620265
Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228
||| || | || ||| ||||| || || ||||| | ||||| | || || || |
Sbjct 1620266 --GACAGTGTGCGACCATCTTCCAACTGCTTGCCTGCAAAGATCAACCTCTGTTGATCTG 1620323
Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288
| ||||| |||||||||||||||||||| ||| | ||| | || || || | |
Sbjct 1620324 GTGGAATACCTTCTTTATCTTGAATTTTAGCTTTCACATTTTCAATTGTATCAGATGGTT 1620383
Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| | || | ||||| ||||||| ||||| || || || |||||
Sbjct 1620384 CTACTTCTAAGGTGATGGTTTTTCCGGTTAACGTTTTGACGAATATCTGCAT 1620435
>seq504
Length=327254
Score = 98.7 bits (108), Expect = 9e-16
Identities = 137/191 (72%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 45151 CCTTT-TGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209
||||| |||||||| |||||| | ||| ||| || | ||||| || || |
Sbjct 214103 CCTTTCTGGATATTGTAATCGGAAAGGGTGCGTCCATCTTCTAGCTGTTTGCCAGCAAAA 214162
Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269
||||||| |||||| || || ||||| |||||||||||||| || ||| || | |
Sbjct 214163 ATCAATCTTTGCTGATCTGGAGGAATTCCTTCTTTATCTTGGATCTTTGCCTTAACATTT 214222
Query 45270 TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACA 45329
|| | ||||| || | || || || || |||| ||||| || || | |||||| |||
Sbjct 214223 TCAATTGTGTCTGAGGGTTCAACCTCAAGGGTAATTGTTTTACCCGTCAAAGTTTTCACA 214282
Query 45330 AAAATTTGCAT 45340
|||||||||||
Sbjct 214283 AAAATTTGCAT 214293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451909765288520
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