Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq57 154 1e-32 seq504 98.7 9e-16 >seq57 Length=2082711 Score = 154 bits (170), Expect = 1e-32 Identities = 181/242 (75%), Gaps = 6/242 (2%) Strand=Plus/Plus Query 45103 TTTATTTTA--TTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGAT 45160 |||| |||| |||| || || | |||| |||||||| | ||||||||||| || || Sbjct 1618600 TTTAATTTAGTTTCCGCCACGCAATCTCAGTACTAGATGTAAAGTTGATTCCTTCTGAAT 1618659 Query 45161 ATTATAATCGCTGAC--GGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGT 45218 |||||||| ||||| ||| | ||| ||||||||||| |||||| | ||||| | | Sbjct 1618660 ATTATAAT--CTGACAAGGTGCGACCATCTTCCAATTGTTTCCCTGCGAAAATCAACCTT 1618717 Query 45219 TGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTG 45278 |||||||| || || || ||||| || ||||||||||| ||| | ||| | ||| Sbjct 1618718 TGCTGGTCAGGTGGTATTCCTTCCTTGTCTTGAATTTTCGCTTTCACATTTTCAATAGTG 1618777 Query 45279 TCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGC 45338 || || | || ||||| ||||||| ||||| || || | |||||| ||||| |||||| Sbjct 1618778 TCAGATGGTTCAACTTCAAGAGTAATGGTTTTTCCAGTCAAAGTTTTCACAAATATTTGC 1618837 Query 45339 AT 45340 || Sbjct 1618838 AT 1618839 Score = 129 bits (142), Expect = 5e-25 Identities = 171/233 (73%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||| | || || | || ||||| || || ||||| || || ||||||||||| Sbjct 1620662 ATTCCTCCTCTCAGTCTGAGTACAAGATGTAGAGTAGATTCTTTCTGAATATTATAATC- 1620720 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 ||| | | | ||| || || || ||||| ||| | || |||| ||| ||||| | Sbjct 1620721 -TGAAAGAGTGCGGCCATCTTCTAACTGCTTTCCGGCGAAGATTAATCTTTGTTGGTCGG 1620779 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGAC 45287 | ||||| ||||||||||| || ||||| || | || | |||| || || || | | Sbjct 1620780 GTGGAATTCCTTCTTTATCCTGGATTTTAGCCTTTA-CGTTCTCTATTGTATCTGACGGC 1620838 Query 45288 TCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| ||||||| ||||| || || || |||||||||||||||||||| Sbjct 1620839 TCAACTTCAAGAGTAATAGTTTTTCCAGTCAGGGTTTTTACAAAAATTTGCAT 1620891 Score = 120 bits (132), Expect = 3e-22 Identities = 167/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||| | || || | || ||||| || || ||||| || || ||||||||||| Sbjct 1620890 ATTCCTCCTCTTAGTCTGAGTACAAGATGTAGAGTAGATTCTTTCTGAATATTATAATC- 1620948 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 ||| | | | ||| || || || ||||| ||| | || |||| ||| ||||| | Sbjct 1620949 -TGAAAGAGTGCGGCCATCTTCTAACTGCTTTCCGGCGAAGATTAATCTTTGTTGGTCTG 1621007 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 ||||||| |||||||||||||||||||| || | ||| | ||||| |||| | Sbjct 1621008 GCGGAATTCCTTCTTTATCTTGAATTTTAGCCTTAACATTTTCGATTGTGTCAGAAGGTT 1621067 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| || |||| |||||| || || || || || || || || ||||| Sbjct 1621068 CAACTTCAAGTGTAATCGTTTTTCCTGTAAGGGTCTTGACGAAGATCTGCAT 1621119 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||| | || || || || ||||| || |||||||| || || ||||| ||||| Sbjct 1619978 ATTCCTCCTCTCAGTCTTAAGACAAGATGAAGAGTTGATTCTTTCTGAATATTGTAATCA 1620037 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || || ||||| || ||| | ||||| | ||||||||| || Sbjct 1620038 GAAAGGGTGCGCCCATCTTCTAACTGTTTCCCAGCGAAAATCAACCTTTGCTGGTCAGGT 1620097 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || ||||| ||||||||||| || ||| | ||| | ||||| |||| || Sbjct 1620098 GGTATTCCTTCCTTATCTTGAATCTTCGCTTTTACATTTTCAATTGTGTCAGAAGGTTCT 1620157 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| ||||||| || || || || ||||| || || || || ||||| Sbjct 1620158 ACTTCAAGAGTAATAGTCTTTCCTGTAAGAGTCTTAACGAAGATCTGCAT 1620207 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| || || || | || ||||||| ||||| || || || || |||||||| Sbjct 1618838 ATACCTCCTCGAAGTCTAAGGACAAGATGCAATGTTGACTCTTTCTGAATGTTATAATCA 1618897 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | ||| ||||| ||||| || ||| | ||||| | |||||| || || Sbjct 1618898 GAAAGAGTTCGACCATCTTCCAACTGTTTCCCAGCGAAAATCAACCTTTGCTGATCGGGA 1618957 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || ||||| ||||||||||| || ||| | ||| | || || |||| || Sbjct 1618958 GGGATTCCTTCCTTATCTTGAATCTTAGCTTTTACATTTTCAATTGTATCAGAAGGTTCT 1619017 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | |||| |||||| || |||| |||||| || || || ||||| Sbjct 1619018 ACTTCTAAGGTAATCGTTTTTCCTGTTAAAGTTTTCACGAATATCTGCAT 1619067 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||| | || || | || ||||| || |||||||| || |||||||||||||| Sbjct 1619294 ATTCCTCCTCTCAGTCTGAGTACAAGATGTAGAGTTGATTCTTTCTGGATATTATAATCT 1619353 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || ||| || | || ||||| ||| | || || | ||| ||||| || Sbjct 1619354 GAGAGAGTGCGGCCATCTTCTAGCTGCTTTCCGGCGAAGATTAACCTTTGTTGGTCTGGT 1619413 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| |||||||||||||||||||| || | ||| | ||||| || | || Sbjct 1619414 GGAATTCCTTCTTTATCTTGAATTTTGGCCTTAACATTTTCGATAGTGTCAGATGGTTCA 1619473 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || |||| || || || || ||||| || ||||| || ||||| Sbjct 1619474 ACTTCAAGTGTAATGGTCTTTCCTGTAAGAGTCTTCACAAAGATCTGCAT 1619523 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || | ||| | | || | ||||| ||| || ||||| || ||||| |||||| Sbjct 1621118 ATTCCACCTCTGAGTCGAAGAACCAAATGCAACGTGGACTCCTTCTGTATATTGTAATCG 1621177 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | ||| ||||| || ||||| || | || ||||||||||| || || Sbjct 1621178 GATAGGGTACGACCATCTTCCAACTGCTTTCCAGCAAAAATTAATCGTTGCTGATCAGGA 1621237 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || ||||| |||||||||||||| || | ||| | || || |||| ||| Sbjct 1621238 GGGATTCCTTCCTTATCTTGAATTTTAGCCTTTACGTTTTCAATAGTATCTGAAGGCTCA 1621297 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| ||||| | || || || || | |||||||| || || ||||| Sbjct 1621298 ACTTCAAGAGTTATTGTCTTCCCCGTCAACGTTTTTACGAAGATCTGCAT 1621347 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || | ||||| | || | ||| || || || |||||||| ||||| ||||| Sbjct 1619522 ATACCCCCTCTGAGCCGAAGAACCAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCA 1619581 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || || || ||||| || | || | || ||||| || || Sbjct 1619582 GATAGAGTTCGGCCATCTTCTAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGT 1619641 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| ||||||||||| || ||||| || | || | |||| || || || | ||| Sbjct 1619642 GGAATTCCTTCTTTATCCTGGATTTTAGCCTTTA-CGTTCTCTATTGTATCAGACGGCTC 1619700 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| ||||||| ||||| || || |||||||| |||||||||||||| Sbjct 1619701 AACTTCAAGAGTAATAGTTTTTCCAGTCAGAGTTTTCACAAAAATTTGCAT 1619751 Score = 107 bits (118), Expect = 2e-18 Identities = 164/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||| | ||||| | || ||||| | || ||||| || |||||||| || || Sbjct 1619750 ATTCCTCCTCTAAGCCTTAGTACAAGATGTAAAGTAGATTCTTTCTGGATATTGTAGTCA 1619809 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 ||| | | || ||| ||||| || || ||||| | ||||||| || || || | Sbjct 1619810 --GACAGAGTGCGACCATCTTCCAACTGCTTGCCTGCAAAGATCAATCTCTGTTGATCTG 1619867 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | ||||| |||||||||||||||||||| ||| | ||||| ||||| || | | Sbjct 1619868 GTGGAATACCTTCTTTATCTTGAATTTTAGCTTTCACATTTTCTATCGTGTCAGACGGTT 1619927 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| | |||| || || || |||| || || ||||| || ||||| Sbjct 1619928 CCACTTCTAAGGTAATGGTCTTTCCAGTTAAGGTCTTAACAAATATCTGCAT 1619979 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 |||| ||| || || || |||||||| ||||| ||||| | ||| ||| ||| Sbjct 1620455 ACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTCC 1620514 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 || || ||||| || | || | || ||||| || || || || ||||| ||||| || Sbjct 1620515 AACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTGG 1620574 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 ||||| ||| | ||| | || || || | ||| ||||| ||||||| ||||| Sbjct 1620575 ATTTTGGCTTTTACATTTTCAATAGTATCAGAGGGCTCCACTTCAAGAGTAATTGTTTTT 1620634 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || |||||||| |||||||||||||| Sbjct 1620635 CCAGTCAGAGTTTTCACAAAAATTTGCAT 1620663 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 |||| ||| || || || |||||||| ||||| ||||| | ||| ||| ||| Sbjct 1619087 ACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTCC 1619146 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 || || ||||| || | || | || ||||| || || || || ||||| ||||| || Sbjct 1619147 AACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTGG 1619206 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 ||||| ||| | ||| | || || || | ||| ||||| ||||||| ||||| Sbjct 1619207 ATTTTGGCTTTAACATTTTCAATAGTATCAGAGGGCTCAACTTCAAGAGTAATTGTTTTT 1619266 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || |||||||| || ||||||||||| Sbjct 1619267 CCAGTCAGAGTTTTCACGAAAATTTGCAT 1619295 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || | ||| | | || | ||||| ||| || || || || ||||| ||||| Sbjct 1620206 ATTCCACCTCTGAGACGAAGAACCAAATGCAACGTGGACTCTTTCTGTATATTGTAATCA 1620265 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 ||| || | || ||| ||||| || || ||||| | ||||| | || || || | Sbjct 1620266 --GACAGTGTGCGACCATCTTCCAACTGCTTGCCTGCAAAGATCAACCTCTGTTGATCTG 1620323 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | ||||| |||||||||||||||||||| ||| | ||| | || || || | | Sbjct 1620324 GTGGAATACCTTCTTTATCTTGAATTTTAGCTTTCACATTTTCAATTGTATCAGATGGTT 1620383 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| | || | ||||| ||||||| ||||| || || || ||||| Sbjct 1620384 CTACTTCTAAGGTGATGGTTTTTCCGGTTAACGTTTTGACGAATATCTGCAT 1620435 >seq504 Length=327254 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/191 (72%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 45151 CCTTT-TGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209 ||||| |||||||| |||||| | ||| ||| || | ||||| || || | Sbjct 214103 CCTTTCTGGATATTGTAATCGGAAAGGGTGCGTCCATCTTCTAGCTGTTTGCCAGCAAAA 214162 Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 ||||||| |||||| || || ||||| |||||||||||||| || ||| || | | Sbjct 214163 ATCAATCTTTGCTGATCTGGAGGAATTCCTTCTTTATCTTGGATCTTTGCCTTAACATTT 214222 Query 45270 TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACA 45329 || | ||||| || | || || || || |||| ||||| || || | |||||| ||| Sbjct 214223 TCAATTGTGTCTGAGGGTTCAACCTCAAGGGTAATTGTTTTACCCGTCAAAGTTTTCACA 214282 Query 45330 AAAATTTGCAT 45340 ||||||||||| Sbjct 214283 AAAATTTGCAT 214293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451909765288520