Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq1601 114 3e-21 >seq1601 Length=30922 Score = 114 bits (126), Expect = 3e-21 Identities = 361/558 (65%), Gaps = 1/558 (0%) Strand=Plus/Plus Query 35327 CCGATTATTCCGTGGATCGGCGGCAAGCGGCGCCTTGCAGACCATCTCATTCCGCGCTTT 35386 ||||| | || ||||| ||||| || ||||| || ||| | || | | |||||||| Sbjct 8262 CCGATACTGCCCTGGATAGGCGGTAAACGGCGACTGGCAAAACAGATTTTACCGCGCTTC 8321 Query 35387 CCGGCGCACGACTGCTACGTTGAAGTGTTCGCGGGCGGCGCTGCGTTGTATTTCATGCGG 35446 |||||||| ||||||||| || || |||| || ||| | | || ||| | Sbjct 8322 CCGGCGCATACCTGCTACGTGGAGCCATTTTGTGGCGCGGCGGCGCTCTTCTTTATGAAG 8381 Query 35447 CCGCCGGCAAAGGTCGAGGTGATCAACGACGTTAACGGCGAACTGATCAACCTGTATCGC 35506 || |||| |||||||| ||||| | |||||||| ||| |||| || ||||| Sbjct 8382 TTACCCAGTAAGGCGGAGGTGATTAACGATATCAACGGCGAGCTGGTCAATCTCTATCGG 8441 Query 35507 GTCGTTCAGCATCACCTCGAGGAATTCGTGCGGCAGTTCAAATGGGCGCTCACCAGTCGG 35566 || | | || || || || || || |||| ||||| ||||||||||| ||| ||| Sbjct 8442 GTGCTGAAACACCATCTGGAAGAGTTTATGCGCCAGTTTAAATGGGCGCTGGTCAGCCGG 8501 Query 35567 CAGGTGTTCGAGTGGCTGAAGCAGACGGCGCCGGAAACGCTCACCGACATCCAG-CGTGC 35625 | ||| | ||| | || ||| || | || || | ||||| | || || || Sbjct 8502 GCGATGTATCAATGGTTAAACATTACGCCGACCGAGACCTTAACCGATAGGAAGCCGCGC 8561 Query 35626 GGCGCGGTTCTACTATCTGCAGAAAAACTGCTTTGGCGGGATTGTCCACGGGCAGACGTT 35685 ||| | ||||| || ||||| ||| | || ||||| | ||| || || || || Sbjct 8562 GGCCTGTTTCTATTACCTGCAAAAACAGGCGTTCGGCGGTAAAGTCGCCGAACACACCTT 8621 Query 35686 CGGCACGGCTACCACTGCGCCGCCGGGTCTGAACTTGCTGCGGATCGAGGAAGAATTATC 35745 ||||| || ||||| ||| | |||||| |||| || || || || || | || Sbjct 8622 CGGCATTGCCACCACCAGAGGGCCACGCCTGAACCTGCTACGCATGGAAGAGGAGCTGTC 8681 Query 35746 CGCGGCGCACTTGCGCCTCGCGAGCGCATATATCGAGCGTCTGGACTGGGCGGATTGCAT 35805 || || |||| | | || | || || | | || ||| | ||||| Sbjct 8682 GCTCGCTCATCTGCGATTGTCACGCACCACCATTGAACAAATCGATTGGTCAACCTGCAT 8741 Query 35806 CGATCGCTATGACCGGCCGCACACGTTGTTCTATCTCGATCCGCCGTATTTCGAGACGCG 35865 | || |||||||| ||||||||| | || || || |||||||||| | || Sbjct 8742 TGCCCGTTATGACCGTCCGCACACGCTCTTTTACTGTGACCCGCCGTATTGGGGTACTGA 8801 Query 35866 CGGCTACGGTGTCGATTT 35883 ||||| || || ||||| Sbjct 8802 GGGCTATGGCGTGGATTT 8819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127520552993652