Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq3969 114 2e-20
>seq3969
Length=6340
Score = 114 bits (126), Expect = 2e-20
Identities = 255/376 (68%), Gaps = 14/376 (4%)
Strand=Plus/Plus
Query 12698 CTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGT 12757
|| ||| ||||| || || || || || | || |||||| | ||| ||||| ||
Sbjct 1651 CTGACGGTCAAAACGGCCCGGACGCAGCAATGCAGGGTCAAGCACGTCAGGACGGTTGGT 1710
Query 12758 CGCCGCGATGACAACGATGCCCGTCTCGTTATCGAAGCCATCCATCTCAGTCAAGAGTTG 12817
|| || || || | ||||| | | || || |||||||||||| || | ||
Sbjct 1711 GGCGGCAATCACGATAATGCCTTCATTGCCTTCAAAACCATCCATCTCAACCAGCATCTG 1770
Query 12818 ATTGATGGTTTGTTCACGTTCATCAT-TCGCGGGCATACCACCCGCACTGCGTTGCTTAC 12876
|| | |||||||||||||||||||| | || | |||||||| ||||| ||
Sbjct 1771 GTTCAGGGTTTGTTCACGTTCATCATGACCACCGCCCA-GACCCGCACCACGTTGGCGAC 1829
Query 12877 CGACGGCGTCAATTTCGTCAATGAAAACGATACA-----CGGTTGATTTTCACGGGCAAC 12931
||||||| || ||||| |||||||| | |||||| ||| | ||||| | ||
Sbjct 1830 CGACGGCATCGATTTCATCAATGAAGATGATACAAGGCGCGGCT-TTTTTCGCCTGC--- 1885
Query 12932 TTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGC 12991
|| || || || ||||| | |||||||||||||| |||||||| ||||| | |
Sbjct 1886 -TCGAACATGTCACGCACACGAGATGCACCGACACCCACGAACATCTCAACAAAGTCAGA 1944
Query 12992 GGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGG 13050
||||| || | || || || || || | |||||| || || || ||| || ||||
Sbjct 1945 ACCGGAA-ATGGTGAAAAATGGCACCTTCGCTTCACCGGCAATCGCCTTGGCAAGCAGGG 2003
Query 13051 TCTTCCCCGTCCCTGG 13066
|||| || || || ||
Sbjct 2004 TCTTACCTGTTCCCGG 2019
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613380380392920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |