Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq57 118 2e-21 seq504 98.7 2e-15 >seq57 Length=2082711 Score = 118 bits (130), Expect = 2e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||| || ||||| || ||||| || || || |||| || || || | | ||| | Sbjct 1619306 AGTCTGAGTACAAGATGTAGAGTTGATTCTTTCTGGATATTATAATCTGAGAGAGTGCGG 1619365 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||| |||||||||||||||||||| | | || ||||| || |||||||||| Sbjct 1619366 CCATCTTCTAGCTGCTTTCCGGCGAAGATTAACCTTTGTTGGTCTGGTGGAATTCCTTCT 1619425 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || ||||| || ||| || ||||| ||||| | || ||| || || | || Sbjct 1619426 TTATCTTGAATTTTGGCCTTAACATTTTCGATAGTGTCAGATGGTTCAACTTCAAGTGTA 1619485 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || ||||| |||||||| || || Sbjct 1619486 ATGGTCTTTCCTGTAAGAGTCTTCACAAAGATCTG 1619520 Score = 109 bits (120), Expect = 1e-18 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || || ||||||||||| | ||||| |||| | ||| | |||||||| | |||| Sbjct 1619549 TGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTCTAACTGC 1619608 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 ||||| || || || ||||||||||| || || |||||||||| ||||| || || Sbjct 1619609 TTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGAATTCCTTCTTTATCCTGGATTTTA 1619668 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| ||| || | || || | | || || || | || || || || || || Sbjct 1619669 GCCTTTACGTTCTCTATTGTATCAGACGGCTCAACTTCAAGAGTAATAGTTTTTCCAGTC 1619728 Query 199607 AGAGTTTTCACAAAAATTTG 199626 |||||||||||||||||||| Sbjct 1619729 AGAGTTTTCACAAAAATTTG 1619748 Score = 104 bits (114), Expect = 6e-17 Identities = 145/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || || ||||||||||| | ||||| |||| | ||| | |||||||||| |||| Sbjct 1620461 TGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTCCAACTGC 1620520 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 ||||| || || || ||||||||||| || || |||||||| ||||| || ||| Sbjct 1620521 TTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTGGAT-TTT 1620579 Query 199547 TGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 || || || ||| | || || | | || || || | || || || || || || Sbjct 1620580 GGCTTTTACATTTTCAATAGTATCAGAGGGCTCCACTTCAAGAGTAATTGTTTTTCCAGT 1620639 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 |||||||||||||||||||| Sbjct 1620640 CAGAGTTTTCACAAAAATTTG 1620660 Score = 98.7 bits (108), Expect = 2e-15 Identities = 144/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || || ||||||||||| | ||||| |||| | ||| | |||||||||| |||| Sbjct 1619093 TGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTCCAACTGC 1619152 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 ||||| || || || ||||||||||| || || |||||||| ||||| || ||| Sbjct 1619153 TTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTGGAT-TTT 1619211 Query 199547 TGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 || || || ||| | || || | | || || || | || || || || || || Sbjct 1619212 GGCTTTAACATTTTCAATAGTATCAGAGGGCTCAACTTCAAGAGTAATTGTTTTTCCAGT 1619271 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 ||||||||||| |||||||| Sbjct 1619272 CAGAGTTTTCACGAAAATTTG 1619292 Score = 95.1 bits (104), Expect = 3e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||| || ||||| || ||||| || || || || | || || || | | ||| | Sbjct 1620674 AGTCTGAGTACAAGATGTAGAGTAGATTCTTTCTGAATATTATAATCTGAAAGAGTGCGG 1620733 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||| | |||||||||||||||||| | | || ||||| || |||||||||| Sbjct 1620734 CCATCTTCTAACTGCTTTCCGGCGAAGATTAATCTTTGTTGGTCGGGTGGAATTCCTTCT 1620793 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||| || || ||| ||| || | || |||| | || || || | || Sbjct 1620794 TTATCCTGGATTTTAGCCTTTACGTTCTCTATTGTATCTGACGGCTCAACTTCAAGAGTA 1620853 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || ||||| ||||||||||| Sbjct 1620854 ATAGTTTTTCCAGTCAGGGTTTTTACAAAAATTTG 1620888 Score = 91.5 bits (100), Expect = 3e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||| || ||||| || ||||| || || || || | || || || | | ||| | Sbjct 1620902 AGTCTGAGTACAAGATGTAGAGTAGATTCTTTCTGAATATTATAATCTGAAAGAGTGCGG 1620961 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||| | |||||||||||||||||| | | || ||||| || |||||||||| Sbjct 1620962 CCATCTTCTAACTGCTTTCCGGCGAAGATTAATCTTTGTTGGTCTGGCGGAATTCCTTCT 1621021 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || ||||| || ||| || ||||| ||||| | | ||| || || | || Sbjct 1621022 TTATCTTGAATTTTAGCCTTAACATTTTCGATTGTGTCAGAAGGTTCAACTTCAAGTGTA 1621081 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || || || || || || || || Sbjct 1621082 ATCGTTTTTCCTGTAAGGGTCTTGACGAAGATCTG 1621116 Score = 86.0 bits (94), Expect = 1e-11 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 |||||| || || || | ||| || ||||| || | || || || | ||| || | || Sbjct 1618624 TCTCAGTACTAGATGTAAAGTTGATTCCTTCTGAATATTATAATCTGACAAGGTGCGACC 1618683 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| || || || ||||| || | | |||||||| || |||||||| Sbjct 1618684 ATCTTCCAATTGTTTCCCTGCGAAAATCAACCTTTGCTGGTCAGGTGGTATTCCTTCCTT 1618743 Query 199534 CTCCTGAATCTTTTGCTT-CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGA 199592 || ||||| ||| |||| ||| ||| | ||||| | || ||| || || | || | Sbjct 1618744 GTCTTGAAT-TTTCGCTTTCACATTTTCAATAGTGTCAGATGGTTCAACTTCAAGAGTAA 1618802 Query 199593 TCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | || || || || | |||||||||||| ||||| Sbjct 1618803 TGGTTTTTCCAGTCAAAGTTTTCACAAATATTTG 1618836 >seq504 Length=327254 Score = 98.7 bits (108), Expect = 2e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 199440 CCTTT-TGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 ||||| |||| ||||| || | | || | ||||||||| ||||| || || || || Sbjct 214103 CCTTTCTGGATATTGTAATCGGAAAGGGTGCGTCCATCTTCTAGCTGTTTGCCAGCAAAA 214162 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558 || | | ||||| || ||| |||||||||| || || |||||| ||| || | Sbjct 214163 ATCAATCTTTGCTGATCTGGAGGAATTCCTTCTTTATCTTGGATCTTTGCCTTAACATTT 214222 Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618 || | ||||||| | ||| || || | || || || |||||||| | |||||||||| Sbjct 214223 TCAATTGTGTCTGAGGGTTCAACCTCAAGGGTAATTGTTTTACCCGTCAAAGTTTTCACA 214282 Query 199619 AAAATTTGGTACATTTTA 199636 ||||||| | | |||||| Sbjct 214283 AAAATTT-GCATATTTTA 214299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178671809722979