Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_014467.1 Length=176788 Score E Sequences producing significant alignments: (Bits) Value seq2248 120 3e-22 >seq2248 Length=16282 Score = 120 bits (132), Expect = 3e-22 Identities = 272/407 (67%), Gaps = 8/407 (2%) Strand=Plus/Minus Query 42328 ATCAAAAAACATGGCTTGCGTAACTCAACACTTTCTGCTTTAATGCCTTGTGAAAGTAGC 42387 ||||||| ||| || |||||||||| || || ||||| || ||||| | |||| Sbjct 489 ATCAAAACACACGGTCTGCGTAACTCCACGCTCTCTGCGTTGATGCCGTCGGAAACCTCG 430 Query 42388 TCACAGGTGAGTAACTCAACCAACGGGATCGAACCTCCACGCGGCCCTGTGAGTGTGAAA 42447 ||||| | ||| | |||||||| |||||||| |||||||| | | ||| | || Sbjct 429 TCACAAATTTCCAACGCCACCAACGGTATCGAACCACCACGCGGTCACATCAGTATCAAG 370 Query 42448 TCTTCTAAGGAAGGTTCATTCAATCAGGTAGTACCGAACCAGAATAATCAGATTGACTTC 42507 | || || || || || ||||| || ||| | | || | | || || | Sbjct 369 GCGTCAAAAGACGGCATTTTGCGCCAGGTGGTGCCGGATTACAAAACCCTGAAGGATGCC 310 Query 42508 TATGATTATCTCTGGACAATGGCAAAACGCGGAAATAAAGGTTATCTGGCTCACGTAGCG 42567 || || | || ||| |||| | || ||| | || || ||| | || | | Sbjct 309 TACGAATTACTGTGGGAAATGCCGAAC------AATGACGGCTACCTGCAACTGGTTGGG 256 Query 42568 GTTATGCAGAAGTTTGTTGATCAGGCTATCTCTGCAAACACCAACTATGATCCGGCTAAC 42627 | |||||||||||||| ||||||||||| ||||| ||||||||||| |||||||| | Sbjct 255 CTGATGCAGAAGTTTGTCGATCAGGCTATTTCTGCCAACACCAACTACGATCCGGCGCGC 196 Query 42628 TTCCCAGATGGTAAAGTGAAATCTGAAATCATCCTTGA-AGATCTGCTGTATGCAAACTA 42686 ||||| || |||||| ||||| | ||| || |||| || | | Sbjct 195 TTCCCGTCAGGAAAAGTG-CCGATGAAACAGTTGCTGACTGACTTGCTTACCGCCTATAA 137 Query 42687 TTTCGGCATCAAAACGCTGTACTACCACAACACCCGCGACGGTGCAG 42733 ||||| | ||||||||||| || || |||||||| |||||||||| Sbjct 136 GTTCGGGTTGAAAACGCTGTATTATCAAAACACCCGTGACGGTGCAG 90 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565476684732960