Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_014467.1
Length=176788
Score E
Sequences producing significant alignments: (Bits) Value
seq2248 120 3e-22
>seq2248
Length=16282
Score = 120 bits (132), Expect = 3e-22
Identities = 272/407 (67%), Gaps = 8/407 (2%)
Strand=Plus/Minus
Query 42328 ATCAAAAAACATGGCTTGCGTAACTCAACACTTTCTGCTTTAATGCCTTGTGAAAGTAGC 42387
||||||| ||| || |||||||||| || || ||||| || ||||| | ||||
Sbjct 489 ATCAAAACACACGGTCTGCGTAACTCCACGCTCTCTGCGTTGATGCCGTCGGAAACCTCG 430
Query 42388 TCACAGGTGAGTAACTCAACCAACGGGATCGAACCTCCACGCGGCCCTGTGAGTGTGAAA 42447
||||| | ||| | |||||||| |||||||| |||||||| | | ||| | ||
Sbjct 429 TCACAAATTTCCAACGCCACCAACGGTATCGAACCACCACGCGGTCACATCAGTATCAAG 370
Query 42448 TCTTCTAAGGAAGGTTCATTCAATCAGGTAGTACCGAACCAGAATAATCAGATTGACTTC 42507
| || || || || || ||||| || ||| | | || | | || || |
Sbjct 369 GCGTCAAAAGACGGCATTTTGCGCCAGGTGGTGCCGGATTACAAAACCCTGAAGGATGCC 310
Query 42508 TATGATTATCTCTGGACAATGGCAAAACGCGGAAATAAAGGTTATCTGGCTCACGTAGCG 42567
|| || | || ||| |||| | || ||| | || || ||| | || | |
Sbjct 309 TACGAATTACTGTGGGAAATGCCGAAC------AATGACGGCTACCTGCAACTGGTTGGG 256
Query 42568 GTTATGCAGAAGTTTGTTGATCAGGCTATCTCTGCAAACACCAACTATGATCCGGCTAAC 42627
| |||||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |
Sbjct 255 CTGATGCAGAAGTTTGTCGATCAGGCTATTTCTGCCAACACCAACTACGATCCGGCGCGC 196
Query 42628 TTCCCAGATGGTAAAGTGAAATCTGAAATCATCCTTGA-AGATCTGCTGTATGCAAACTA 42686
||||| || |||||| ||||| | ||| || |||| || | |
Sbjct 195 TTCCCGTCAGGAAAAGTG-CCGATGAAACAGTTGCTGACTGACTTGCTTACCGCCTATAA 137
Query 42687 TTTCGGCATCAAAACGCTGTACTACCACAACACCCGCGACGGTGCAG 42733
||||| | ||||||||||| || || |||||||| ||||||||||
Sbjct 136 GTTCGGGTTGAAAACGCTGTATTATCAAAACACCCGTGACGGTGCAG 90
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565476684732960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |