Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq3969 120 4e-22 >seq3969 Length=6340 Score = 120 bits (132), Expect = 4e-22 Identities = 284/423 (67%), Gaps = 16/423 (4%) Strand=Plus/Plus Query 15836 CAAGATCTTCTCGCGTCCCCGAACACTTGGGAGAGCTACTTGGATCTTACGATCAAAGCG 15895 || ||||| ||| || || |||||| || ||| | || | || ||| ||||| || Sbjct 1606 CAGGATCTGCTCACGACCACGAACATCCGGCAGACCAACCACTACCTGACGGTCAAAACG 1665 Query 15896 ACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGCGATGACAAC 15955 || || || || | || ||||| | ||| || || || ||||| || || | Sbjct 1666 GCCCGGACGCAGCAATGCAGGGTCAAGCACGTCAGGACGGTTGGTGGCGGCAATCACGAT 1725 Query 15956 AATACCTGTTTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTC 16015 ||| ||| | | ||||||||||||||||| || | |||||| | |||||||| Sbjct 1726 AATGCCTTCATTGCCTTCAAAACCATCCATCTCAACCAGCATCTGGTTCAGGGTTTGTTC 1785 Query 16016 CCGTTCATCAT-TCGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCT 16074 |||||||||| | || | ||| |||| ||||| || |||||||| || | Sbjct 1786 ACGTTCATCATGACCACCGCCCA-GACCCGCACCACGTTGGCGACCGACGGCATCGATTT 1844 Query 16075 CATCAATGAAGACGATGCATGG------TTGATTTTCGCGAGCGACTTCAAAGAGATCCC 16128 |||||||||||| ||| || || || ||||||| || || || | || | Sbjct 1845 CATCAATGAAGATGATACAAGGCGCGGCTT--TTTTCGCCTGC----TCGAACATGTCAC 1898 Query 16129 GTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-G 16187 | ||||| || || ||||| || |||||||| ||||||| | ||||| || | | Sbjct 1899 GCACACGAGATGCACCGACACCCACGAACATCTCAACAAAGTCAGAACCGGAA-ATGGTG 1957 Query 16188 ATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCT 16247 | || || || || | |||||| ||||| || ||| || || |||||||| || || Sbjct 1958 AAAAATGGCACCTTCGCTTCACCGGCAATCGCCTTGGCAAGCAGGGTCTTACCTGTTCCC 2017 Query 16248 GGC 16250 ||| Sbjct 2018 GGC 2020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620614084786640