Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq3969 120 4e-22
>seq3969
Length=6340
Score = 120 bits (132), Expect = 4e-22
Identities = 284/423 (67%), Gaps = 16/423 (4%)
Strand=Plus/Plus
Query 15836 CAAGATCTTCTCGCGTCCCCGAACACTTGGGAGAGCTACTTGGATCTTACGATCAAAGCG 15895
|| ||||| ||| || || |||||| || ||| | || | || ||| ||||| ||
Sbjct 1606 CAGGATCTGCTCACGACCACGAACATCCGGCAGACCAACCACTACCTGACGGTCAAAACG 1665
Query 15896 ACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGCGATGACAAC 15955
|| || || || | || ||||| | ||| || || || ||||| || || |
Sbjct 1666 GCCCGGACGCAGCAATGCAGGGTCAAGCACGTCAGGACGGTTGGTGGCGGCAATCACGAT 1725
Query 15956 AATACCTGTTTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTC 16015
||| ||| | | ||||||||||||||||| || | |||||| | ||||||||
Sbjct 1726 AATGCCTTCATTGCCTTCAAAACCATCCATCTCAACCAGCATCTGGTTCAGGGTTTGTTC 1785
Query 16016 CCGTTCATCAT-TCGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCT 16074
|||||||||| | || | ||| |||| ||||| || |||||||| || |
Sbjct 1786 ACGTTCATCATGACCACCGCCCA-GACCCGCACCACGTTGGCGACCGACGGCATCGATTT 1844
Query 16075 CATCAATGAAGACGATGCATGG------TTGATTTTCGCGAGCGACTTCAAAGAGATCCC 16128
|||||||||||| ||| || || || ||||||| || || || | || |
Sbjct 1845 CATCAATGAAGATGATACAAGGCGCGGCTT--TTTTCGCCTGC----TCGAACATGTCAC 1898
Query 16129 GTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-G 16187
| ||||| || || ||||| || |||||||| ||||||| | ||||| || | |
Sbjct 1899 GCACACGAGATGCACCGACACCCACGAACATCTCAACAAAGTCAGAACCGGAA-ATGGTG 1957
Query 16188 ATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCT 16247
| || || || || | |||||| ||||| || ||| || || |||||||| || ||
Sbjct 1958 AAAAATGGCACCTTCGCTTCACCGGCAATCGCCTTGGCAAGCAGGGTCTTACCTGTTCCC 2017
Query 16248 GGC 16250
|||
Sbjct 2018 GGC 2020
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620614084786640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |